RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 NR3C1P04150 777 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 APODP05090 189 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 USP17L7P0C7H9 530 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 TCF3P15923 654 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 GABRG2P18507 467 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 GGCXP38435 758 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 AARSP49588 968 aaKnown RBP eCLIP9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 TMPRSS3P57727 454 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 LILRA4P59901 499 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 TFAMQ00059 246 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 CYP24A1Q07973 514 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 SMARCB1Q12824 385 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 USP4Q13107 963 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 SERINC3Q13530 473 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 MORC3Q14149 939 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 PSMD6Q15008 389 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 NFIL3Q16649 462 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 HLA-BQ31612 363 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 ZCWPW2Q504Y3 356 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 BROXQ5VW32 411 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 ANKRD40Q6AI12 368 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 C1orf127Q8N9H9 656 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 GOLGA5Q8TBA6 731 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 SPATA18Q8TC71 538 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 GPT2Q8TD30 523 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 C2orf15Q8WU43 125 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 LINC00597Q9H2U6 94 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 IL21RQ9HBE5 538 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 INTS13Q9NVM9 706 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 RMND1Q9NWS8 449 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 HOOK1Q9UJC3 728 aaKnown RBP9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 PCDHGA1Q9Y5H4 931 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 DOPEY2Q9Y3R5 2298 aa9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 UBR5O95071 2799 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC1-202ENST00000540486 CREBBPQ92793 2442 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 SCN1AP35498 2009 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 BIN1O00499 593 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 XPOTO43592 962 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 CALUO43852 315 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 KIF20AO95235 890 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 KAT7O95251 611 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 C1SP09871 688 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 HMGA1P17096 107 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 GRIA2P42262 883 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 GRK6P43250 576 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 MMP16P51512 607 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 MCCD1P59942 119 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 DLG4P78352 724 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 CLDN10P78369 228 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 CCDC173Q0VFZ6 552 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 MYO1EQ12965 1108 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 ADAM9Q13443 819 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 SURF1Q15526 300 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 C1orf220Q5T0J3 134 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 EMC10Q5UCC4 262 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 PRICKLE2Q7Z3G6 844 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 CSGALNACT2Q8N6G5 542 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 KIAA1958Q8N8K9 716 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 SPPL2BQ8TCT7 592 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 PARD3BQ8TEW8 1205 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 GIPC2Q8TF65 315 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 CACTINQ8WUQ7 758 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 SNRNP27Q8WVK2 155 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 TTC9Q92623 222 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 EEF2KMTQ96G04 330 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 GBP4Q96PP9 640 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 UXTQ9UBK9 157 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 SIX4Q9UIU6 781 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 AGAP1Q9UPQ3 857 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 FNDC3AQ9Y2H6 1198 aaKnown RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 HEMK1Q9Y5R4 338 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 AHCTF1Q8WYP5 2266 aa9.4□□□□□ -0.9
TRAPPC1-202ENST00000540486 MYO16Q9Y6X6 1858 aa9.4□□□□□ -0.91
TRAPPC1-202ENST00000540486 TSC2P49815 1807 aa9.4□□□□□ -0.91
TRAPPC1-202ENST00000540486 MUC22E2RYF6 1773 aaPredicted RBP9.4□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRAV19A0A0A6YYK7 116 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 LRRIQ3A6PVS8 624 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 S1PR4O95977 384 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 C4BPAP04003 597 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 ITGB3P05106 788 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 CSH1P0DML2 217 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 CSH2P0DML3 217 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 DLATP10515 647 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 PAX3P23760 479 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 NR2F2P24468 414 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 MAOBP27338 520 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 POLR2BP30876 1174 aaKnown RBP9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 DUOXA2Q1HG44 320 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 GAB4Q2WGN9 574 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 EDRF1Q3B7T1 1238 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 SLC39A12Q504Y0 691 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 CCDC157Q569K6 752 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 CEP135Q66GS9 1140 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 DSTYKQ6XUX3 929 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 TRAPPC11Q7Z392 1133 aa9.39□□□□□ -0.91
TRAPPC1-202ENST00000540486 WDR49Q8IV35 697 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms