RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 DHX33Q9H6R0 707 aaKnown RBP13.41□□□□□ -0.26
DNMT1-203ENST00000540357 COPS7BQ9H9Q2 264 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-203ENST00000540357 PXMP2Q9NR77 195 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 INPP5FQ9Y2H2 1132 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 HBS1LQ9Y450 684 aaKnown RBP13.41□□□□□ -0.26
DNMT1-203ENST00000540357 C15orf38-AP3S2A0A0A6YYH1 394 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 BPGMP07738 259 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 PTPN11Q06124 597 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-203ENST00000540357 SFSWAPQ12872 951 aaKnown RBP13.41□□□□□ -0.26
DNMT1-203ENST00000540357 NME3Q13232 169 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 ARPINQ7Z6K5 226 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 STRA8Q7Z7C7 330 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 FBXW8Q8N3Y1 598 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 TRPC4APQ8TEL6 797 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 CYP3A43Q9HB55 503 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 PRPF19Q9UMS4 504 aaKnown RBP13.41□□□□□ -0.26
DNMT1-203ENST00000540357 CSADQ9Y600 493 aa13.41□□□□□ -0.26
DNMT1-203ENST00000540357 KLHL33A6NCF5 533 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 EEF2KO00418 725 aaKnown RBP13.4□□□□□ -0.26
DNMT1-203ENST00000540357 NFIBO00712 420 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 TBX10O75333 385 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 NR2C2P49116 596 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SOX10P56693 466 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 TPI1P60174 286 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 ENPEPQ07075 957 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SUPT20HL1Q3ZLR7 823 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 TDRD10Q5VZ19 366 aaKnown RBP13.4□□□□□ -0.26
DNMT1-203ENST00000540357 RWDD4Q6NW29 188 aaKnown RBP13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SNX32Q86XE0 403 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 CD101Q93033 1021 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 CCDC97Q96F63 343 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-203ENST00000540357 TMEM176AQ96HP8 235 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 ZBTB18Q99592 522 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 KRT82Q9NSB4 513 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 UPP2O95045 317 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-203ENST00000540357 RARBP10826 455 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 CPT1BQ92523 772 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 USP13Q92995 863 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-203ENST00000540357 ATP6V1E2Q96A05 226 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 ELMO2Q96JJ3 720 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 PDCD2LQ9BRP1 358 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 BEGAINQ9BUH8 593 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 ADNPQ9H2P0 1102 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SLIT2O94813 1529 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 WDR27A2RRH5 827 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 HEATR9A2RTY3 570 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 TMEM150BA6NC51 233 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 TBC1D12O60347 775 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 HUS1O60921 280 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 USP1O94782 785 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 VCLP18206 1134 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 RTP1P59025 263 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SPP2Q13103 211 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 RNF135Q8IUD6 432 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 BRSK2Q8IWQ3 736 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 DDIASQ8IXT1 998 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
DNMT1-203ENST00000540357 ZNF555Q8NEP9 628 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 CCDC126Q96EE4 140 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 HPDLQ96IR7 371 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 STK32BQ9NY57 414 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 ZNF180Q9UJW8 692 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 AK5Q9Y6K8 562 aa13.4□□□□□ -0.26
DNMT1-203ENST00000540357 CYP2F1P24903 491 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 HOXD13P35453 343 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 MRPS22P82650 360 aaKnown RBP13.39□□□□□ -0.27
DNMT1-203ENST00000540357 C16orf72Q14CZ0 275 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 FNBP1LQ5T0N5 605 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 GADL1Q6ZQY3 521 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 SEPT1Q8WYJ6 367 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 GPATCH2LQ9NWQ4 482 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 LZTS1Q9Y250 596 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 SNCAIPQ9Y6H5 919 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 WASF2Q9Y6W5 498 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 A0A087WXM4 84 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 HNRNPRO43390 633 aaKnown RBP13.39□□□□□ -0.27
DNMT1-203ENST00000540357 E2F6O75461 281 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 CHRM1P11229 460 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-203ENST00000540357 GNAZP19086 355 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 CRHR1P34998 444 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 CAP2P40123 477 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 MTMR2Q13614 643 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 SPANXN3Q5MJ09 141 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 PPP1R2P1Q96PQ5 205 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 SYT15Q9BQS2 421 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 CIDEBQ9UHD4 219 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 RAB26Q9ULW5 256 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
DNMT1-203ENST00000540357 TMEM114B3SHH9 223 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms