RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 USP37Q86T82 979 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 VSIG10LQ86VR7 867 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 THNSL1Q8IYQ7 743 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 SLC7A3Q8WY07 619 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 GDF15Q99988 308 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 CAAP1Q9H8G2 361 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 TMED5Q9Y3A6 229 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 TMEM247A6NEH6 219 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 XPOTO43592 962 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 LGALS2P05162 132 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 MCF2P10911 925 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 ARSEP51690 589 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 NR1H2P55055 460 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 MFAP3P55082 362 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 ARL4CP56559 192 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 GEMIN4P57678 1058 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 KRT76Q01546 638 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 SPDYAQ5MJ70 313 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 C9orf50Q5SZB4 431 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 TMEM53Q6P2H8 277 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 NUDCD3Q8IVD9 361 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 RBM15BQ8NDT2 890 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 GSTCDQ8NEC7 633 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 SLC30A5Q8TAD4 765 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 CYP2W1Q8TAV3 490 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 IFT43Q96FT9 208 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 DCUN1D5Q9BTE7 237 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 MRPS26Q9BYN8 205 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 GID8Q9NWU2 228 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 RAB20Q9NX57 234 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 NCANO14594 1321 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 TCRBV7S2A1N4TA0A589 114 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 DYTNA2CJ06 578 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 KIAA0355O15063 1070 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 PRPF4O43172 522 aaKnown RBP eCLIP8.98□□□□□ -0.973e-7■□□□□ 8.7
DDB1-217ENST00000540166 TM7SF2O76062 418 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 S100BP04271 92 aaPredicted RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 BGNP21810 368 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 FUT4P22083 530 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 VAMP7P51809 220 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 AQP4P55087 323 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 PURAQ00577 322 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 MTERF2Q49AM1 385 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 PDCD4Q53EL6 469 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 AAGABQ6PD74 315 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 NUP93Q8N1F7 819 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 SMYD1Q8NB12 490 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 SH2D3AQ9BRG2 576 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 SHCBP1LQ9BZQ2 653 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 CHST7Q9NS84 486 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 AJAP1Q9UKB5 411 aaPredicted RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 MAD1L1Q9Y6D9 718 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 DOCK3Q8IZD9 2030 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 PLIN4Q96Q06 1357 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 CFLARO15519 480 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 B4GALT4O60513 344 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 UBA1P22314 1058 aaKnown RBP8.97□□□□□ -0.97
DDB1-217ENST00000540166 CRABP2P29373 138 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 XIAPP98170 497 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 KRT72Q14CN4 511 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 NADK2Q4G0N4 442 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 CBWD6Q4V339 395 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 CBWD3Q5JTY5 395 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 CBWD5Q5RIA9 395 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 TWF2Q6IBS0 349 aaKnown RBP8.97□□□□□ -0.97
DDB1-217ENST00000540166 RAPH1Q70E73 1250 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 CATSPER4Q7RTX7 472 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 KBTBD2Q8IY47 623 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 PDIK1LQ8N165 341 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 REPS2Q8NFH8 660 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 PPTC7Q8NI37 304 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 SLC5A5Q92911 643 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 NMUR2Q9GZQ4 415 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 BCAS3Q9H6U6 928 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 GPAMQ9HCL2 828 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 S100A14Q9HCY8 104 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 SLC24A2Q9UI40 661 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 PPM1HQ9ULR3 514 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 PCDHB12Q9Y5F1 795 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 DNAJC25-GNG10A0A024R161 153 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 LOC100653049A0A140TA62 436 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 MEI4A8MW99 385 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 WDR64B1ANS9 1081 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 TM9SF1O15321 606 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 MSH4O15457 936 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 HBP1O60381 514 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 PPP1R11O60927 126 aaPredicted RBP8.97□□□□□ -0.97
DDB1-217ENST00000540166 ADAMTS4O75173 837 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 KRT34O76011 436 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 S100A1P23297 94 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 NFKBIAP25963 317 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 CST5P28325 142 aaPredicted RBP8.97□□□□□ -0.97
DDB1-217ENST00000540166 RABGGTBP53611 331 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 COPAP53621 1224 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 OXCT1P55809 520 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 SULT2A1Q06520 285 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 FAAP100Q0VG06 881 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 TBCCQ15814 346 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 HIF1AQ16665 826 aa8.97□□□□□ -0.97
DDB1-217ENST00000540166 EXOC8Q8IYI6 725 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms