RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 PPP1R13BQ96KQ4 1090 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 CPXM1Q96SM3 734 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 DCLK3Q9C098 648 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 CBX8Q9HC52 389 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 NLRC4Q9NPP4 1024 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 PRMT8Q9NR22 394 aaPredicted RBP9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 SPHK2Q9NRA0 654 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 MARK1Q9P0L2 795 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 TJP2Q9UDY2 1190 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 ZNF510Q9Y2H8 683 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 HBS1LQ9Y450 684 aaKnown RBP9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 MYO15AQ9UKN7 3530 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 OTOGLQ3ZCN5 2332 aa9.39□□□□□ -0.91
LRTOMT-216ENST00000539271 VPS13AQ96RL7 3174 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SDK1Q7Z5N4 2213 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 TEX33O43247 280 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 LAMTOR5O43504 91 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 GFPT2O94808 682 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 HMBSP08397 361 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 CORO1AP31146 461 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 CDH5P33151 784 aaPredicted RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SOX5P35711 763 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 EIF2DP41214 584 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SLC6A11P48066 632 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 GAD2Q05329 585 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 ZNF528Q3MIS6 628 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 FBXO43Q4G163 708 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 PTPN20Q4JDL3 420 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 NOP9Q86U38 636 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 C12orf40Q86WS4 652 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 TMEM25Q86YD3 366 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 ETFBKMTQ8IXQ9 262 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SPEM1Q8N4L4 309 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 TMEM35BQ8NCS4 154 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 NEK11Q8NG66 645 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SPOCK2Q92563 424 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 EZH1Q92800 747 aaPredicted RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 GOLGA1Q92805 767 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 ATOH1Q92858 354 aaPredicted RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 FAM149B1Q96BN6 582 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 NOX5Q96PH1 765 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SPAG5Q96R06 1193 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SFMBT1Q9UHJ3 866 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 FBXO4Q9UKT5 387 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 AGO1Q9UL18 857 aaKnown RBP9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 CEP83Q9Y592 693 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 GVINP1Q7Z2Y8 2422 aa9.38□□□□□ -0.91
LRTOMT-216ENST00000539271 SPAG17Q6Q759 2223 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 WDR87Q6ZQQ6 2873 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 A0A0A0MRY4 1105 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 A0A1B0GTH6 734 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 MSI1O43347 362 aaKnown RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 RNF40O75150 1001 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 PAPSS2O95340 614 aaPredicted RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 IGLV3-27P01718 113 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 ERBB2P04626 1255 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 GLI1P08151 1106 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 SP9P0CG40 484 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 TDGF1P13385 188 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 NCAM1P13591 858 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 STAT1P42224 750 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 CCR3P51677 355 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 SNX16P57768 344 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 SATB1Q01826 763 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 CSTF1Q05048 431 aaKnown RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 MESP2Q0VG99 397 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 NNTQ13423 1086 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 ANO4Q32M45 955 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 FILIP1LQ4L180 1135 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 TAF3Q5VWG9 929 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 PKN3Q6P5Z2 889 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 TPGS1Q6ZTW0 290 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 LUZP1Q86V48 1076 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 ZNF677Q86XU0 584 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 DENND1CQ8IV53 801 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 FAM217AQ8IXS0 508 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 DQX1Q8TE96 717 aaKnown RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 SLC20A1Q8WUM9 679 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 NELL1Q92832 810 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 P2RY11Q96G91 374 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 PIWIL1Q96J94 861 aaKnown RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 PHF12Q96QT6 1004 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 PNKPQ96T60 521 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 TRIM62Q9BVG3 475 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 BBS2Q9BXC9 721 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 PDCL3Q9H2J4 239 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 POPDC2Q9HBU9 364 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 ASNSD1Q9NWL6 643 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 WDR35Q9P2L0 1181 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 NOCTQ9UK39 431 aaKnown RBP9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 NAALADL1Q9UQQ1 740 aa9.37□□□□□ -0.91
LRTOMT-216ENST00000539271 A0A1W2PQC6 194 aa9.36□□□□□ -0.91
LRTOMT-216ENST00000539271 CHURC1-FNTBB4DL54 471 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms