RNA–Protein interactions for RNA: ENST00000538375.5

COPS7A-207, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 898 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-207ENST00000538375 PTPN5P54829 565 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 SLC6A3Q01959 620 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 GAD2Q05329 585 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 GRSF1Q12849 480 aaKnown RBP eCLIP13.78□□□□□ -0.2
COPS7A-207ENST00000538375 ASIC2Q16515 512 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 PTPN20Q4JDL3 420 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 LY6G5CQ5SRR4 150 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 SFMBT2Q5VUG0 894 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 SYPL2Q5VXT5 272 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 TOGARAM2Q6ZUX3 1019 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 TMEM25Q86YD3 366 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 CCDC105Q8IYK2 499 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 DTWD2Q8NBA8 298 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 ADAM32Q8TC27 787 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 CD101Q93033 1021 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 BHMTQ93088 406 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 PLD4Q96BZ4 506 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 CHFRQ96EP1 664 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 PRRX2Q99811 253 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 AGPAT1Q99943 283 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 P2RY13Q9BPV8 354 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 OSBPL6Q9BZF3 934 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
COPS7A-207ENST00000538375 POPDC2Q9HBU9 364 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 SPATA6Q9NWH7 488 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-207ENST00000538375 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
COPS7A-207ENST00000538375 ZNF510Q9Y2H8 683 aa13.78□□□□□ -0.2
COPS7A-207ENST00000538375 HBS1LQ9Y450 684 aaKnown RBP13.78□□□□□ -0.2
COPS7A-207ENST00000538375 SYNJ2BP-COX16A0A087WUM0 186 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 LRRC53A6NM62 1247 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 CBFA2T2O43439 604 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 KLKB1P03952 638 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 FYNP06241 537 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 ADH5P11766 374 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-207ENST00000538375 SLC6A11P48066 632 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 TBX4P57082 545 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 ZNF445P59923 1031 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 FMO1Q01740 532 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 LRRC32Q14392 662 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 NAIF1Q69YI7 327 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-207ENST00000538375 TRIM72Q6ZMU5 477 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 DEFB106AQ8N104 65 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-207ENST00000538375 SLC30A5Q8TAD4 765 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 BAP1Q92560 729 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 PIWIL1Q96J94 861 aaKnown RBP13.77□□□□□ -0.21
COPS7A-207ENST00000538375 PCDHB18PQ96TA0 734 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 BBS2Q9BXC9 721 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 FBRSL1Q9HCM7 1045 aaKnown RBP13.77□□□□□ -0.21
COPS7A-207ENST00000538375 RBM12Q9NTZ6 932 aaKnown RBP13.77□□□□□ -0.21
COPS7A-207ENST00000538375 COX16Q9P0S2 106 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 AGO1Q9UL18 857 aaKnown RBP13.77□□□□□ -0.21
COPS7A-207ENST00000538375 MYO6Q9UM54 1294 aa13.77□□□□□ -0.21
COPS7A-207ENST00000538375 NEDD8-MDP1E9PL57 170 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 TRDMT1O14717 391 aaKnown RBP13.76□□□□□ -0.21
COPS7A-207ENST00000538375 GREM1O60565 184 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 HSF2BPO75031 334 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 GLI1P08151 1106 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 CHRNB1P11230 501 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 GBP1P32455 592 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 CHKAP35790 457 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 NOMO3P69849 1222 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 CDK17Q00537 523 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 TRIP4Q15650 581 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-207ENST00000538375 FAM102AQ5T9C2 384 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-207ENST00000538375 FSTL4Q6MZW2 842 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 MSANTD2Q6P1R3 559 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 MMS22LQ6ZRQ5 1243 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 IRF2BP2Q7Z5L9 587 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 UNC45BQ8IWX7 931 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 DQX1Q8TE96 717 aaKnown RBP13.76□□□□□ -0.21
COPS7A-207ENST00000538375 RNF34Q969K3 372 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 CLDN23Q96B33 292 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 EDEM3Q9BZQ6 932 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 FAM204AQ9H8W3 233 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 WDR35Q9P2L0 1181 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 MYO15AQ9UKN7 3530 aa13.76□□□□□ -0.21
COPS7A-207ENST00000538375 HELZP42694 1942 aaKnown RBP13.76□□□□□ -0.21
COPS7A-207ENST00000538375 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-207ENST00000538375 TSPAN3O60637 253 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 TRUB2O95900 331 aaKnown RBP13.75□□□□□ -0.21
COPS7A-207ENST00000538375 EGFP01133 1207 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 CYP1A1P04798 512 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-207ENST00000538375 CYBBP04839 570 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 SKILP12757 684 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 DRD1P21728 446 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 OPRD1P41143 372 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 NSFP46459 744 aaKnown RBP13.75□□□□□ -0.21
COPS7A-207ENST00000538375 GABRB2P47870 512 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 SLC11A2P49281 568 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 FZD5Q13467 585 aa13.75□□□□□ -0.21
COPS7A-207ENST00000538375 CLEC16AQ2KHT3 1053 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms