RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 CTIFO43310 598 aaKnown RBP12.84□□□□□ -0.35
DDB1-209ENST00000537877 LRG1P02750 347 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 C8AP07357 584 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 PBX2P40425 430 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 CDKN2BP42772 138 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 CXCR3P49682 368 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 ARSEP51690 589 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 CLCN4P51793 760 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
DDB1-209ENST00000537877 CDH6P55285 790 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 SCAPQ12770 1279 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 NME3Q13232 169 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 EIF4EBP2Q13542 120 aaPredicted RBP12.84□□□□□ -0.35
DDB1-209ENST00000537877 CAMK1Q14012 370 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 KRT81Q14533 505 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 DPYSL2Q16555 572 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 ARL13BQ3SXY8 428 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 BRMS1LQ5PSV4 323 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 TADA2BQ86TJ2 420 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 TDHQ8IZJ6 230 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 MMGT1Q8N4V1 131 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 KCTD6Q8NC69 237 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 LRRN4CLQ8ND94 238 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 FAM71BQ8TC56 605 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 MICAL1Q8TDZ2 1067 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
DDB1-209ENST00000537877 ZNF670Q9BS34 389 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 PLEKHA4Q9H4M7 779 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 OSER1Q9NX31 292 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 CALCOCO1Q9P1Z2 691 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 FZD10Q9ULW2 581 aa12.84□□□□□ -0.35
DDB1-209ENST00000537877 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 TJP3O95049 919 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 RARGP13631 454 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 IRS1P35568 1242 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 PGFP49763 221 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 TUBP50607 506 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 ZNF135P52742 658 aaPredicted RBP12.83□□□□□ -0.36
DDB1-209ENST00000537877 C2orf54Q08AI8 447 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 KLF1Q13351 362 aaPredicted RBP12.83□□□□□ -0.36
DDB1-209ENST00000537877 EFHC2Q5JST6 749 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 TEX35Q5T0J7 233 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 ELMOD1Q8N336 334 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 CCDC185Q8N715 623 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 ADAM32Q8TC27 787 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 HDAC7Q8WUI4 952 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 UBXN4Q92575 508 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 CASP10Q92851 521 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 ZNF512Q96ME7 567 aaPredicted RBP12.83□□□□□ -0.36
DDB1-209ENST00000537877 DHX35Q9H5Z1 703 aaKnown RBP12.83□□□□□ -0.36
DDB1-209ENST00000537877 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 PCDH18Q9HCL0 1135 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 RBM12Q9NTZ6 932 aaKnown RBP12.83□□□□□ -0.36
DDB1-209ENST00000537877 TRPM5Q9NZQ8 1165 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 COX16Q9P0S2 106 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 RCOR3Q9P2K3 495 aaPredicted RBP12.83□□□□□ -0.36
DDB1-209ENST00000537877 DPP7Q9UHL4 492 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 TLR6Q9Y2C9 796 aa12.83□□□□□ -0.36
DDB1-209ENST00000537877 MTCL1Q9Y4B5 1905 aaKnown RBP12.83□□□□□ -0.36
DDB1-209ENST00000537877 TLR5O60602 858 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 PHF2O75151 1096 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 SLC2A3P11169 496 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 HOXA9P31269 272 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 CCR1P32246 355 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 ADRA1BP35368 520 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 TFDP2Q14188 446 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 DPYSL3Q14195 570 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 PPP2R5DQ14738 602 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 SIX1Q15475 284 aaPredicted RBP12.82□□□□□ -0.36
DDB1-209ENST00000537877 CYP1B1Q16678 543 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 ZC3H12AQ5D1E8 599 aaKnown RBP12.82□□□□□ -0.36
DDB1-209ENST00000537877 CCDC70Q6NSX1 233 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 KLHDC10Q6PID8 442 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 BBS12Q6ZW61 710 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 DNAJB7Q7Z6W7 309 aaPredicted RBP12.82□□□□□ -0.36
DDB1-209ENST00000537877 C12orf50Q8NA57 414 aaPredicted RBP12.82□□□□□ -0.36
DDB1-209ENST00000537877 NOA1Q8NC60 698 aaKnown RBP12.82□□□□□ -0.36
DDB1-209ENST00000537877 FAF2Q96CS3 445 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 RUNDC3BQ96NL0 473 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 AP1M1Q9BXS5 423 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 CALN1Q9BXU9 219 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 WDCPQ9H6R7 721 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 PRDM16Q9HAZ2 1276 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 HOMER3Q9NSC5 361 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
DDB1-209ENST00000537877 GPATCH2LQ9NWQ4 482 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 ARHGEF38Q9NXL2 777 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 ATG2AQ2TAZ0 1938 aa12.82□□□□□ -0.36
DDB1-209ENST00000537877 ZNF840PA6NDX5 716 aa12.81□□□□□ -0.36
DDB1-209ENST00000537877 CLASP2O75122 1294 aaKnown RBP12.81□□□□□ -0.36
DDB1-209ENST00000537877 ZMYND10O75800 440 aa12.81□□□□□ -0.36
DDB1-209ENST00000537877 CSPG5O95196 566 aa12.81□□□□□ -0.36
DDB1-209ENST00000537877 SPATA31D3P0C874 917 aa12.81□□□□□ -0.36
DDB1-209ENST00000537877 L1CAMP32004 1257 aa12.81□□□□□ -0.36
DDB1-209ENST00000537877 ARL4AP40617 200 aa12.81□□□□□ -0.36
DDB1-209ENST00000537877 KPNA1P52294 538 aaPredicted RBP12.81□□□□□ -0.36
DDB1-209ENST00000537877 SMAD3P84022 425 aaKnown RBP12.81□□□□□ -0.36
DDB1-209ENST00000537877 RING1Q06587 406 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms