RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SMYD2Q9NRG4 433 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 PPM1HQ9ULR3 514 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 COMMD3-BMI1R4GMX3 469 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 A0A088AWK7 358 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CCDC195A0A1B0GUA6 201 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 KCNN4O15554 427 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 MSCO60682 206 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 BAG2O95816 211 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 ZBED1O96006 694 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 HOXC6P09630 235 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CSH1P0DML2 217 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CSH2P0DML3 217 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 TPSB2P20231 275 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 GSTT1P30711 240 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 L1CAMP32004 1257 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 MAGEA3P43357 314 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 BTKQ06187 659 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 ASPHQ12797 758 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 TUBB3Q13509 450 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 PRKG1Q13976 671 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 TAF5Q15542 800 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 TARBP2Q15633 366 aaKnown RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 TPSAB1Q15661 275 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 RABGAP1LQ5R372 815 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 TREML2Q5T2D2 321 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 UNC5AQ6ZN44 842 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 SDCCAG8Q86SQ7 713 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NCAPG2Q86XI2 1143 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 EGFL6Q8IUX8 553 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 MAP7D3Q8IWC1 876 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NME8Q8N427 588 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF526Q8TF50 670 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CLPTM1LQ96KA5 538 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 ACO2Q99798 780 aaKnown RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 ADPGKQ9BRR6 497 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CNPY3Q9BT09 278 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 MIS12Q9H081 205 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF487B1APH4 448 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 APOL1O14791 398 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 B4GALT4O60513 344 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 GLRA3O75311 464 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 UBA1P22314 1058 aaKnown RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 EDNRBP24530 442 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NRLP54845 237 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NAB1Q13506 487 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 BMPR2Q13873 1038 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 GRM2Q14416 872 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 KRT81Q14533 505 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 MAP3K21Q5TCX8 1036 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CYP4V2Q6ZWL3 525 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 RAPH1Q70E73 1250 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CYS1Q717R9 158 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CDKL3Q8IVW4 592 aaPredicted RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NDUFAF2Q8N183 169 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 PIWIL2Q8TC59 973 aaKnown RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 HAPLN3Q96S86 360 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 EBNA1BP2Q99848 306 aaKnown RBP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 EPB41L1Q9H4G0 881 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NRBP2Q9NSY0 501 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPSF7-218ENST00000537641 DNAJC28Q9NX36 388 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 NDUFA13Q9P0J0 144 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 BTBD7Q9P203 1132 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 PCDHA11Q9Y5I1 949 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 CSADQ9Y600 493 aa12.57□□□□□ -0.4
CPSF7-218ENST00000537641 SMIM31A0A1B0GVY4 71 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 DPYSL4O14531 572 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 AVILO75366 819 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 USP1O94782 785 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 TOMM70O94826 608 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 MICAL2O94851 1124 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 FARP2O94887 1054 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 ITGBL1O95965 494 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 PABPC4LP0CB38 370 aaKnown RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 ZCCHC18P0CG32 403 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 KITP10721 976 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 UQCRBP14927 111 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 ALOX15P16050 662 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 PRDX6P30041 224 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 CLCN2P51788 898 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 COPAP53621 1224 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 TFAMQ00059 246 aaKnown RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 PTPN11Q06124 597 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 FSTL1Q12841 308 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 MMRN1Q13201 1228 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 UBAP2LQ14157 1087 aaKnown RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF667Q5HYK9 610 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 FAM102AQ5T9C2 384 aaPredicted RBP12.56□□□□□ -0.4
CPSF7-218ENST00000537641 RASIP1Q5U651 963 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 FAM160B1Q5W0V3 765 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 SLC9A4Q6AI14 798 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 PGM2L1Q6PCE3 622 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 ZBTB33Q86T24 672 aa12.56□□□□□ -0.4
CPSF7-218ENST00000537641 RASSF3Q86WH2 238 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms