RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 MARCH2Q9P0N8 246 aa25.29■■□□□ 1.64
HMGA2-208ENST00000537429 CALCOCO1Q9P1Z2 691 aa25.29■■□□□ 1.64
HMGA2-208ENST00000537429 DENND4AQ7Z401 1863 aa25.29■■□□□ 1.64
HMGA2-208ENST00000537429 TRAV19A0A0A6YYK7 116 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 MACROD2A1Z1Q3 448 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 M0QYT0 321 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 CCP110O43303 1012 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 ENDOD1O94919 500 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 PSMA2P25787 234 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 ATP11AP98196 1134 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 SMAD4Q13485 552 aaKnown RBP25.28■■□□□ 1.64
HMGA2-208ENST00000537429 PIGHQ14442 188 aaPredicted RBP25.28■■□□□ 1.64
HMGA2-208ENST00000537429 ARHGAP29Q52LW3 1261 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 SH3PXD2AQ5TCZ1 1133 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 CMTM8Q8IZV2 173 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 CCAR2Q8N163 923 aaKnown RBP25.28■■□□□ 1.64
HMGA2-208ENST00000537429 RNF10Q8N5U6 811 aaKnown RBP25.28■■□□□ 1.64
HMGA2-208ENST00000537429 NIPA2Q8N8Q9 360 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 TPCN2Q8NHX9 752 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 ADAM32Q8TC27 787 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 ZSWIM3Q96MP5 696 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 KCND1Q9NSA2 647 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.28■■□□□ 1.64
HMGA2-208ENST00000537429 LCMT1Q9UIC8 334 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 GUCA1BQ9UMX6 200 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 PAXBP1Q9Y5B6 917 aa25.28■■□□□ 1.64
HMGA2-208ENST00000537429 MBTPS2O43462 519 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 SLC7A9P82251 487 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 ACAP1Q15027 740 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 STRADAQ7RTN6 431 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 RASAL2Q9UJF2 1139 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 ZKSCAN5Q9Y2L8 839 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 USP27XA6NNY8 438 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 IRAK2O43187 625 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 PROSCO94903 275 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 CKMP06732 381 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 NAP1L1P55209 391 aaKnown RBP25.27■■□□□ 1.64
HMGA2-208ENST00000537429 MESDQ14696 234 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 IFI16Q16666 785 aaKnown RBP25.27■■□□□ 1.64
HMGA2-208ENST00000537429 CDO1Q16878 200 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 MIB1Q86YT6 1006 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 SERPINB11Q96P15 392 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 DDIT4Q9NX09 232 aa25.27■■□□□ 1.64
HMGA2-208ENST00000537429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.27■■□□□ 1.64
HMGA2-208ENST00000537429 BUB1BO60566 1050 aaPredicted RBP25.26■■□□□ 1.63
HMGA2-208ENST00000537429 MOCS3O95396 460 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 F9P00740 461 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 MBL2P11226 248 aaPredicted RBP25.26■■□□□ 1.63
HMGA2-208ENST00000537429 GBP1P32455 592 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 NNTQ13423 1086 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 LEXMQ3ZCV2 418 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 FAM172AQ8WUF8 416 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 ZFRQ96KR1 1074 aaKnown RBP25.26■■□□□ 1.63
HMGA2-208ENST00000537429 KLF16Q9BXK1 252 aaPredicted RBP25.26■■□□□ 1.63
HMGA2-208ENST00000537429 FAM204AQ9H8W3 233 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 PRDM6Q9NQX0 595 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 GDE1Q9NZC3 331 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 CDH7Q9ULB5 785 aa25.26■■□□□ 1.63
HMGA2-208ENST00000537429 MSI1O43347 362 aaKnown RBP25.25■■□□□ 1.63
HMGA2-208ENST00000537429 DESP17661 470 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 WEE1P30291 646 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 AVPR1AP37288 418 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 HDAC4P56524 1084 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 ZXDBP98169 803 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 DEUP1Q05D60 604 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 NME3Q13232 169 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 RAB6CQ53S08 254 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 ARFGAP1Q8N6T3 406 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.25■■□□□ 1.63
HMGA2-208ENST00000537429 RAB6CQ9H0N0 254 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 PIGVQ9NUD9 493 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 TLR6Q9Y2C9 796 aa25.25■■□□□ 1.63
HMGA2-208ENST00000537429 HBS1LQ9Y450 684 aaKnown RBP25.25■■□□□ 1.63
HMGA2-208ENST00000537429 COL6A3P12111 3177 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 SLC12A8A0AV02 714 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 RNF8O76064 485 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 GBP2P32456 591 aaPredicted RBP25.24■■□□□ 1.63
HMGA2-208ENST00000537429 RDXP35241 583 aaKnown RBP25.24■■□□□ 1.63
HMGA2-208ENST00000537429 ATXN1P54253 815 aaKnown RBP25.24■■□□□ 1.63
HMGA2-208ENST00000537429 COG7P83436 770 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 TRIP4Q15650 581 aaPredicted RBP25.24■■□□□ 1.63
HMGA2-208ENST00000537429 ZSCAN18Q8TBC5 510 aaPredicted RBP25.24■■□□□ 1.63
HMGA2-208ENST00000537429 SLC39A13Q96H72 371 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 MYADMQ96S97 322 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 TMEM51Q9NW97 253 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 ARHGAP26Q9UNA1 814 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 CPQQ9Y646 472 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 CAPN6Q9Y6Q1 641 aa25.24■■□□□ 1.63
HMGA2-208ENST00000537429 SYNJ2BP-COX16A0A087WUM0 186 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 GRID2IPA4D2P6 1211 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 GOLGA6L9A6NEM1 432 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 LRCH4O75427 683 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 IGLV3-27P01718 113 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 MAN1A1P33908 653 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 KPNA1P52294 538 aaPredicted RBP25.23■■□□□ 1.63
HMGA2-208ENST00000537429 TFF2Q03403 129 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 C11orf63Q6NUN7 778 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 ARID3BQ8IVW6 561 aaPredicted RBP25.23■■□□□ 1.63
HMGA2-208ENST00000537429 GKN1Q9NS71 199 aa25.23■■□□□ 1.63
HMGA2-208ENST00000537429 TDP1Q9NUW8 608 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms