RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SLC10A2Q12908 348 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 FAM182AQ5T1J6 154 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 MAMDC4Q6UXC1 1216 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 APBB1IPQ7Z5R6 666 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 GCOM2Q9BZD3 368 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 MMADHCQ9H3L0 296 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 TUT1Q9H6E5 874 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 MAD1L1Q9Y6D9 718 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 ESRRAP11474 423 aaPredicted RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 SARNPP82979 210 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 GBE1Q04446 702 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 ZBTB6Q15916 424 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 ZNF534Q76KX8 674 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 SLC26A9Q7LBE3 791 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 NAF1Q96HR8 494 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 SLC13A1Q9BZW2 595 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 DHX35Q9H5Z1 703 aaKnown RBP16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 VTA1Q9NP79 307 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 TRIP11Q15643 1979 aa16.59■□□□□ 0.25
CHMP1A-202ENST00000535997 FAM237BA0A1B0GVD1 139 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 RBM47A0AV96 593 aaKnown RBP16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 BIRC5O15392 142 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 ECM2O94769 699 aaPredicted RBP16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 LUC7L3O95232 432 aaKnown RBP16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 CYP2C8P10632 490 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 CNTFP26441 200 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 TMPRSS15P98073 1019 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 TAF11Q15544 211 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 KCNT2Q6UVM3 1135 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 TIFABQ6ZNK6 161 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 NUDCD3Q8IVD9 361 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 ANKRD52Q8NB46 1076 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 ARMC2Q8NEN0 867 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 OR6B3Q8NGW1 331 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 ZMAT2Q96NC0 199 aaKnown RBP16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 SGIP1Q9BQI5 828 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 MTMR10Q9NXD2 777 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 TAS2R1Q9NYW7 299 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 MOCS1Q9NZB8 636 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 NME7Q9Y5B8 376 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 PCDHA11Q9Y5I1 949 aa16.58■□□□□ 0.25
CHMP1A-202ENST00000535997 FCHO1O14526 889 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 DDNO94850 711 aaPredicted RBP16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 ZNF286BP0CG31 522 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 CSH1P0DML2 217 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 CSH2P0DML3 217 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 RPL34P49207 117 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 BST1Q10588 318 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 SEMA5AQ13591 1074 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 HEATR6Q6AI08 1181 aaKnown RBP16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 TTC8Q8TAM2 541 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.24
CHMP1A-202ENST00000535997 PLXNA1Q9UIW2 1896 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 HMX2A2RU54 273 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 KIF1CO43896 1103 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 UGT1A9O60656 530 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 TFE3P19532 575 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 HOXA11P31270 313 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 PTDSS1P48651 473 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 OCRLQ01968 901 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 ZNF792Q3KQV3 632 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 KHDC1Q4VXA5 237 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 MARCH8Q5T0T0 291 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 TRMT10BQ6PF06 316 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 HACE1Q8IYU2 909 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 NDUFAF2Q8N183 169 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 CRYBG2Q8N1P7 616 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 C7orf31Q8N865 590 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 BEST2Q8NFU1 509 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 LRRN4Q8WUT4 740 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 QKIQ96PU8 341 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 CSPG4P5Q96PW8 444 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 UGT1A7Q9HAW7 530 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 UGT1A10Q9HAW8 530 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 UGT1A8Q9HAW9 530 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 AP4E1Q9UPM8 1137 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 A8MXQ7 604 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 PPEF2O14830 753 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 LIN7AO14910 233 aaPredicted RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 ATP5BP06576 529 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 RARBP10826 455 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 MLNP12872 115 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 GCKP35557 465 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 BST2Q10589 180 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 GRIK4Q16099 956 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 SOWAHAQ2M3V2 549 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 CMPK2Q5EBM0 449 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 STXBP5Q5T5C0 1151 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 MROH9Q5TGP6 573 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 MCUR1Q96AQ8 359 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 OPTNQ96CV9 577 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 MECRQ9BV79 373 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 PRDM16Q9HAZ2 1276 aa16.57■□□□□ 0.24
CHMP1A-202ENST00000535997 HACD1B0YJ81 288 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 ALDH1A2O94788 518 aa16.56■□□□□ 0.24
CHMP1A-202ENST00000535997 NPTXRO95502 500 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms