RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ADAM32Q8TC27 787 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 EDAQ92838 391 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 VCPIP1Q96JH7 1222 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 ISCUQ9H1K1 167 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 GRPEL1Q9HAV7 217 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 DUS2Q9NX74 493 aaKnown RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 WDR35Q9P2L0 1181 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 TMEM59LQ9UK28 342 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 SH3BP1Q9Y3L3 701 aa12.59□□□□□ -0.39
CHD4-203ENST00000535717 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
CHD4-203ENST00000535717 SSU72P8A0A1W2PR75 194 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 TCRBV5S1A1TA0A578 114 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 PI4K2BG5E9Z4 385 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 GJB6O95452 261 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 TRUB2O95900 331 aaKnown RBP12.58□□□□□ -0.4
CHD4-203ENST00000535717 IGLV3-25P01717 112 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 IGLV3-27P01718 113 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 KLKB1P03952 638 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 ALADP13716 330 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 ARSAP15289 507 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 RRM1P23921 792 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 NOS2P35228 1153 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 MATKP42679 507 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 CDK17Q00537 523 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 PDGFRLQ15198 375 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 TRIP4Q15650 581 aaPredicted RBP12.58□□□□□ -0.4
CHD4-203ENST00000535717 EML3Q32P44 896 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 IER5LQ5T953 404 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 TRNP1Q6NT89 227 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 Q6ZNB5 142 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.58□□□□□ -0.4
CHD4-203ENST00000535717 BBS7Q8IWZ6 715 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 SPC24Q8NBT2 197 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 C3orf20Q8ND61 904 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 IRF7Q92985 503 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 PLD4Q96BZ4 506 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 ADAM33Q9BZ11 813 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 EBF3Q9H4W6 596 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 NHEJ1Q9H9Q4 299 aaPredicted RBP12.58□□□□□ -0.4
CHD4-203ENST00000535717 TRPV5Q9NQA5 729 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 HPS4Q9NQG7 708 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 METTL5Q9NRN9 209 aaKnown RBP12.58□□□□□ -0.4
CHD4-203ENST00000535717 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHD4-203ENST00000535717 NENFQ9UMX5 172 aa12.58□□□□□ -0.4
CHD4-203ENST00000535717 OTOL1A6NHN0 477 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 SLC9A3R1O14745 358 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 KRT3P12035 628 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 TFE3P19532 575 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 CORO1AP31146 461 aaKnown RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 FLT3P36888 993 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 IFNAR2P48551 515 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 KPNA1P52294 538 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 TBX4P57082 545 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 PFKPQ01813 784 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 GFPT1Q06210 699 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 EIF4EBP2Q13542 120 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 SLC18A3Q16572 532 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 PPP1R15BQ5SWA1 713 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 CCDC122Q5T0U0 273 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 OTUD1Q5VV17 481 aaPredicted RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 DNAJC24Q6P3W2 148 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 ALKBH5Q6P6C2 394 aaKnown RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 ARCQ7LC44 396 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 ADGRG2Q8IZP9 1017 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 EMC1Q8N766 993 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 JOSD2Q8TAC2 188 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 TTC8Q8TAM2 541 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 DNASE1L2Q92874 299 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 NT5C3BQ969T7 300 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 SLC39A13Q96H72 371 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 SERPINB11Q96P15 392 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 PANX2Q96RD6 677 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 NPY6RQ99463 290 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 DDX23Q9BUQ8 820 aaKnown RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 FAM204AQ9H8W3 233 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 GTSE1Q9NYZ3 720 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 CALCOCO1Q9P1Z2 691 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 TBC1D14Q9P2M4 693 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 IMPACTQ9P2X3 320 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 WNT16Q9UBV4 365 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 LSM7Q9UK45 103 aaKnown RBP12.57□□□□□ -0.4
CHD4-203ENST00000535717 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 COL4A2P08572 1712 aa12.57□□□□□ -0.4
CHD4-203ENST00000535717 TICRRQ7Z2Z1 1910 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 C2CD4BA6NLJ0 364 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 SIGLEC16A6NMB1 481 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 IRAK2O43187 625 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 AKR1B10O60218 316 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 RFC1P35251 1148 aaPredicted RBP12.56□□□□□ -0.4
CHD4-203ENST00000535717 RPL7AP62424 266 aaKnown RBP12.56□□□□□ -0.4
CHD4-203ENST00000535717 RING1Q06587 406 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 SIGLEC14Q08ET2 396 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 NNTQ13423 1086 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 MAMLD1Q13495 774 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 RUNX3Q13761 415 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 ITPRIPL2Q3MIP1 535 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 SLC25A52Q3SY17 297 aa12.56□□□□□ -0.4
CHD4-203ENST00000535717 SLC44A4Q53GD3 710 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms