RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 VCPIP1Q96JH7 1222 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 NPY6RQ99463 290 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 TRIM62Q9BVG3 475 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 BRD9Q9H8M2 597 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 NHEJ1Q9H9Q4 299 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-202ENST00000535042 HPS4Q9NQG7 708 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 SLC2A4RGQ9NR83 387 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 CALCOCO1Q9P1Z2 691 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 WDR35Q9P2L0 1181 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 SH3BP1Q9Y3L3 701 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 UNC80Q8N2C7 3258 aa13.7□□□□□ -0.22
TMEM258-202ENST00000535042 E2F8A0AVK6 867 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 OTOL1A6NHN0 477 aaPredicted RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 DCXO43602 365 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 IGLV3-27P01718 113 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 FECHP22830 423 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 NOS2P35228 1153 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 RFC1P35251 1148 aaPredicted RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 MATKP42679 507 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 SLC18A3Q16572 532 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 CCDC122Q5T0U0 273 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 PPP1R2P3Q6NXS1 205 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 CC2D1AQ6P1N0 951 aaPredicted RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 ALKBH5Q6P6C2 394 aaKnown RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 Q6ZNB5 142 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 HTR3DQ70Z44 454 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 BBS7Q8IWZ6 715 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 C3orf20Q8ND61 904 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 TTC8Q8TAM2 541 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 OSCP1Q8WVF1 389 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 SLC39A13Q96H72 371 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 DDX23Q9BUQ8 820 aaKnown RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 EBF3Q9H4W6 596 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 SPTLC3Q9NUV7 552 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 THG1LQ9NWX6 298 aaKnown RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 DUS2Q9NX74 493 aaKnown RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 IMPACTQ9P2X3 320 aa13.69□□□□□ -0.22
TMEM258-202ENST00000535042 HBS1LQ9Y450 684 aaKnown RBP13.69□□□□□ -0.22
TMEM258-202ENST00000535042 C2CD4BA6NLJ0 364 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 SIGLEC16A6NMB1 481 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 IRAK2O43187 625 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 AKR1B10O60218 316 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 KRT3P12035 628 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 ABCB4P21439 1286 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
TMEM258-202ENST00000535042 IFNAR2P48551 515 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 TBX4P57082 545 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 RPL7AP62424 266 aaKnown RBP13.68□□□□□ -0.22
TMEM258-202ENST00000535042 MAMLD1Q13495 774 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 EML3Q32P44 896 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 RAB6CQ53S08 254 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 PLEKHA7Q6IQ23 1121 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 DNAJC24Q6P3W2 148 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 ARCQ7LC44 396 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 UBALD2Q8IYN6 164 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 KIAA1958Q8N8K9 716 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 RXFP2Q8WXD0 754 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 EDAQ92838 391 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 IRF7Q92985 503 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 NT5C3BQ969T7 300 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 PLD4Q96BZ4 506 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 ZNF653Q96CK0 615 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 FCRL2Q96LA5 508 aaPredicted RBP13.68□□□□□ -0.22
TMEM258-202ENST00000535042 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 CFAP57Q96MR6 1250 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 SERPINB11Q96P15 392 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 TBCBQ99426 244 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 SELENOOQ9BVL4 669 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 RAB6CQ9H0N0 254 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 THAP2Q9H0W7 228 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 GTSE1Q9NYZ3 720 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 CNOT8Q9UFF9 292 aaKnown RBP13.68□□□□□ -0.22
TMEM258-202ENST00000535042 AGO1Q9UL18 857 aaKnown RBP13.68□□□□□ -0.22
TMEM258-202ENST00000535042 MYO10Q9HD67 2058 aa13.68□□□□□ -0.22
TMEM258-202ENST00000535042 SYNJ2BP-COX16A0A087WUM0 186 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 PI4K2BG5E9Z4 385 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 M0QYT0 321 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 TNFRSF10AO00220 468 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 SULT1E1P49888 294 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 ATXN1P54253 815 aaKnown RBP13.67□□□□□ -0.22
TMEM258-202ENST00000535042 GALCP54803 685 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 OGDHQ02218 1023 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 NNTQ13423 1086 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 RUNX3Q13761 415 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 PDGFRLQ15198 375 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 CCDC14Q49A88 953 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 ZC3H12AQ5D1E8 599 aaKnown RBP13.67□□□□□ -0.22
TMEM258-202ENST00000535042 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 BNIPLQ7Z465 357 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 TMEM139Q8IV31 216 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 DENND1CQ8IV53 801 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 ADGRG2Q8IZP9 1017 aa13.67□□□□□ -0.22
TMEM258-202ENST00000535042 DNASE1L2Q92874 299 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms