RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 ARHGEF4Q9NR80 690 aa13.98□□□□□ -0.17
CAPN1-227ENST00000533909 DEC1Q9P2X7 70 aa13.98□□□□□ -0.17
CAPN1-227ENST00000533909 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
CAPN1-227ENST00000533909 FBXO4Q9UKT5 387 aa13.98□□□□□ -0.17
CAPN1-227ENST00000533909 ZFHX2Q9C0A1 2572 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-227ENST00000533909 WDFY4Q6ZS81 3184 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 RNF40O75150 1001 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 SOX5P35711 763 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 EIF2DP41214 584 aaKnown RBP13.97□□□□□ -0.17
CAPN1-227ENST00000533909 YWHAZP63104 245 aaKnown RBP13.97□□□□□ -0.17
CAPN1-227ENST00000533909 ARID5AQ03989 594 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 KDSRQ06136 332 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-227ENST00000533909 OR6B2Q6IFH4 312 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 Q6ZS52 159 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 TMEM110Q86TL2 294 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 NAT16Q8N8M0 369 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 BHMTQ93088 406 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 SERPINB11Q96P15 392 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 ERGIC2Q96RQ1 377 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 FUCA2Q9BTY2 467 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 HSD3B7Q9H2F3 369 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 POPDC2Q9HBU9 364 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 CBX8Q9HC52 389 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 DNAJC17Q9NVM6 304 aaKnown RBP13.97□□□□□ -0.17
CAPN1-227ENST00000533909 CYTH4Q9UIA0 394 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 SIK3Q9Y2K2 1263 aa13.97□□□□□ -0.17
CAPN1-227ENST00000533909 CACNA1IQ9P0X4 2223 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 TBC1D3BA6NDS4 549 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 HOXC11O43248 304 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 PAPSS1O43252 624 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 GABBR2O75899 941 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 KAT7O95251 611 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 LSM8O95777 96 aaKnown RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 SP9P0CG40 484 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 OPRD1P41143 372 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 GRIA2P42262 883 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 SLC6A11P48066 632 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 RPL34P49207 117 aaKnown RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 SLC11A2P49281 568 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 NRLP54845 237 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 SEC13P55735 322 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 TBX4P57082 545 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 TRIP4Q15650 581 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 EFHC1Q5JVL4 640 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 NUGGCQ68CJ6 796 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 GRAMD4Q6IC98 578 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 MSANTD2Q6P1R3 559 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 Q6ZNB5 142 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 NOP9Q86U38 636 aaKnown RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 LUZP1Q86V48 1076 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 ZNF677Q86XU0 584 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 UNC45BQ8IWX7 931 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 ACDQ96AP0 544 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 CPXM1Q96SM3 734 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 FAM204AQ9H8W3 233 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 FBRSL1Q9HCM7 1045 aaKnown RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 SEPT11Q9NVA2 429 aaKnown RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 AGO1Q9UL18 857 aaKnown RBP13.96□□□□□ -0.17
CAPN1-227ENST00000533909 SLC8A2Q9UPR5 921 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 NAALADL1Q9UQQ1 740 aa13.96□□□□□ -0.17
CAPN1-227ENST00000533909 EPHB6O15197 1021 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 GREM1O60565 184 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 HSF2BPO75031 334 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 TULP3O75386 442 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 KLKB1P03952 638 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 GLI1P08151 1106 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 TYRP14679 529 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 CDK17Q00537 523 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 SATB1Q01826 763 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 IQCB1Q15051 598 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 ZNF528Q3MIS6 628 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 C2orf27AQ580R0 203 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 TSSK4Q6SA08 328 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 APTXQ7Z2E3 356 aaKnown RBP13.95□□□□□ -0.18
CAPN1-227ENST00000533909 ERICH1Q86X53 443 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 ZDHHC17Q8IUH5 632 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 WDTC1Q8N5D0 677 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 ADAM32Q8TC27 787 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 EPS8L1Q8TE68 723 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 DQX1Q8TE96 717 aaKnown RBP13.95□□□□□ -0.18
CAPN1-227ENST00000533909 DDI1Q8WTU0 396 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 RNF34Q969K3 372 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 DDX50Q9BQ39 737 aaKnown RBP13.95□□□□□ -0.18
CAPN1-227ENST00000533909 FAM126AQ9BYI3 521 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-227ENST00000533909 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
CAPN1-227ENST00000533909 PRMT8Q9NR22 394 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-227ENST00000533909 MARK1Q9P0L2 795 aa13.95□□□□□ -0.18
CAPN1-227ENST00000533909 FAM170AA1A519 330 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 TYW5A2RUC4 315 aaKnown RBP13.94□□□□□ -0.18
CAPN1-227ENST00000533909 GRAP2O75791 330 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 LATS1O95835 1130 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 APOEP02649 317 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 ERBB2P04626 1255 aa13.94□□□□□ -0.18
CAPN1-227ENST00000533909 MMEP08473 750 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms