RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CDH7Q9ULB5 785 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 STAP1Q9ULZ2 295 aa12.43□□□□□ -0.42
COMMD9-208ENST00000533643 M0QYT0 321 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 MYO1FO00160 1098 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 CCP110O43303 1012 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 ZSCAN12O43309 604 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 MSI1O43347 362 aaKnown RBP12.42□□□□□ -0.42
COMMD9-208ENST00000533643 BUB1O43683 1085 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 KRT86O43790 486 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 PROSCO94903 275 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 MBL2P11226 248 aaPredicted RBP12.42□□□□□ -0.42
COMMD9-208ENST00000533643 PSMA2P25787 234 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 WEE1P30291 646 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 SLC7A9P82251 487 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 TFF2Q03403 129 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 EIF4EBP2Q13542 120 aaPredicted RBP12.42□□□□□ -0.42
COMMD9-208ENST00000533643 CPNE8Q86YQ8 564 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 ARFGAP1Q8N6T3 406 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 TPCN2Q8NHX9 752 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 FAM172AQ8WUF8 416 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 PGAP3Q96FM1 320 aaPredicted RBP12.42□□□□□ -0.42
COMMD9-208ENST00000533643 KLF16Q9BXK1 252 aaPredicted RBP12.42□□□□□ -0.42
COMMD9-208ENST00000533643 TSGA10Q9BZW7 698 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 NACA2Q9H009 215 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 FAM204AQ9H8W3 233 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 LZTFL1Q9NQ48 299 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 GKN1Q9NS71 199 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 DDIT4Q9NX09 232 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 SMPD4Q9NXE4 827 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 TRMT1Q9NXH9 659 aaKnown RBP12.42□□□□□ -0.42
COMMD9-208ENST00000533643 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.42
COMMD9-208ENST00000533643 GUCA1BQ9UMX6 200 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 PAXBP1Q9Y5B6 917 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 CPQQ9Y646 472 aa12.42□□□□□ -0.42
COMMD9-208ENST00000533643 ANAPC1Q9H1A4 1944 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 SLC12A8A0AV02 714 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 MACROD2A1Z1Q3 448 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 USP27XA6NNY8 438 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 TMEM110-MUSTN1A8MSY1 372 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 IRAK2O43187 625 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 BUB1BO60566 1050 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 OBSL1O75147 1896 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 MOCS3O95396 460 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 PRAMEF12O95522 483 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 CKMP06732 381 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 GBP1P32455 592 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 DEKP35659 375 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 AVPR1AP37288 418 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 CXCR3P49682 368 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 ATXN1P54253 815 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 HDAC4P56524 1084 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 ZXDBP98169 803 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 NME3Q13232 169 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 NNTQ13423 1086 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 PIGHQ14442 188 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 MESDQ14696 234 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 TRIP4Q15650 581 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 SMAD2Q15796 467 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 CDO1Q16878 200 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 FAM78AQ5JUQ0 283 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 STRADAQ7RTN6 431 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 ARID3BQ8IVW6 561 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 CCAR2Q8N163 923 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 RNF10Q8N5U6 811 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 NIPA2Q8N8Q9 360 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 ZSCAN18Q8TBC5 510 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 KIAA1524Q8TCG1 905 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 ADAMTS19Q8TE59 1207 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 PRUNE2Q8WUY3 3088 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 SMARCD2Q92925 531 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 USP13Q92995 863 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 WBP2Q969T9 261 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 SLC39A13Q96H72 371 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 ASB16Q96NS5 453 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 SERPINB11Q96P15 392 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 SMG9Q9H0W8 520 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 KCND1Q9NSA2 647 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 PIGVQ9NUD9 493 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 ARHGAP26Q9UNA1 814 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 CCL26Q9Y258 94 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 TLR6Q9Y2C9 796 aa12.41□□□□□ -0.42
COMMD9-208ENST00000533643 HBS1LQ9Y450 684 aaKnown RBP12.41□□□□□ -0.42
COMMD9-208ENST00000533643 GRID2IPA4D2P6 1211 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 F9P00740 461 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 IGLV3-27P01718 113 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 HMBSP08397 361 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 LAMP2P13473 410 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 GBP2P32456 591 aaPredicted RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 MAN1A1P33908 653 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 RDXP35241 583 aaKnown RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 KCNQ1P51787 676 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 KPNA1P52294 538 aaPredicted RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 NAP1L1P55209 391 aaKnown RBP12.4□□□□□ -0.42
COMMD9-208ENST00000533643 TBX4P57082 545 aa12.4□□□□□ -0.42
COMMD9-208ENST00000533643 COG7P83436 770 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms