RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TM4SF5O14894 197 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 XPO1O14980 1071 aaKnown RBP13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 TRIM24O15164 1050 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 ADRB1P08588 477 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 VDRP11473 427 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 HOXB2P14652 356 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 CD19P15391 556 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 BCKDHBP21953 392 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 TKTL1P51854 596 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 BCAT1P54687 386 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 YWHAGP61981 247 aaKnown RBP eCLIP13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 PM20D1Q6GTS8 502 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 ISM2Q6H9L7 571 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 RLN3Q8WXF3 142 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 IPO9Q96P70 1041 aaKnown RBP13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 MARCH2Q9P0N8 246 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 CEP295Q9C0D2 2601 aa13.02□□□□□ -0.33
CAPRIN1-213ENST00000533562 PMM2O15305 246 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 KLKB1P03952 638 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 CYBBP04839 570 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 CISD3P0C7P0 127 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 CORO1AP31146 461 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 DPP6P42658 865 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 FMO5P49326 533 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 PDE4CQ08493 712 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 BST2Q10589 180 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 LRMPQ12912 555 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 E2F5Q15329 346 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 GOLGA7BQ2TAP0 167 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 MAP7D1Q3KQU3 841 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 TCEAL6Q6IPX3 200 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 SLC36A4Q6YBV0 504 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 PIGKQ92643 395 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 BHMTQ93088 406 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 TCEAL3Q969E4 200 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 LSM14BQ9BX40 385 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 OLA1Q9NTK5 396 aaKnown RBP13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 PLK2Q9NYY3 685 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 FBXO10Q9UK96 956 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 TSPAN16Q9UKR8 245 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 NUP205Q92621 2012 aa13.01□□□□□ -0.33
CAPRIN1-213ENST00000533562 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 A0A1W2PQF6 199 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 SLC12A8A0AV02 714 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 BICDL2A1A5D9 508 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 PRRT4C9JH25 899 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 GFRA2O00451 464 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 NPC1O15118 1278 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 P4HA2O15460 535 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 AP5Z1O43299 807 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 ZNF217O75362 1048 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 HMBSP08397 361 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 PAEPP09466 180 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 SETSIPP0DME0 302 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 WASP42768 502 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 HARS2P49590 506 aaKnown RBP13□□□□□ -0.33
CAPRIN1-213ENST00000533562 DAB2IPQ5VWQ8 1189 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 EGFLAMQ63HQ2 1017 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 KLHL10Q6JEL2 608 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 FOXR2Q6PJQ5 311 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 DENND1CQ8IV53 801 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 TMEFF1Q8IYR6 380 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 SIX6OS1Q8N1H7 587 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 RNF139Q8WU17 664 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 NT5C1BQ96P26 610 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 GABRG3Q99928 467 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 EDEM2Q9BV94 578 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 ULBP1Q9BZM6 244 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 MAN1B1Q9UKM7 699 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 AGO1Q9UL18 857 aaKnown RBP13□□□□□ -0.33
CAPRIN1-213ENST00000533562 HCN2Q9UL51 889 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 SLC27A6Q9Y2P4 619 aa13□□□□□ -0.33
CAPRIN1-213ENST00000533562 CACNA1BQ00975 2339 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 LNP1A1A4G5 178 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 C4orf47A7E2U8 309 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 TULP2O00295 520 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 GNA14O95837 355 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 PENKP01210 267 aaPredicted RBP12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 GABRG2P18507 467 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 PI4KAP42356 2102 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 ZNF132P52740 706 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 LMAN2Q12907 356 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 STILQ15468 1287 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 FYB2Q5VWT5 728 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 BSPRYQ5W0U4 402 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 LYSMD4Q5XG99 296 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 TMEM270Q6UE05 265 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 LCLAT1Q6UWP7 414 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 CPXM2Q8N436 756 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 FRMD1Q8N878 549 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 UBA3Q8TBC4 463 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 IPO4Q8TEX9 1081 aaKnown RBP12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 DDI1Q8WTU0 396 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 NELFBQ8WX92 580 aa12.99□□□□□ -0.33
CAPRIN1-213ENST00000533562 KCTD13Q8WZ19 329 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms