RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 TDRD12Q587J7 1177 aaKnown RBP25.91■■□□□ 1.74
USP48-214ENST00000532737 HTR3DQ70Z44 454 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 SIX5Q8N196 739 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 OR8K1Q8NGG5 319 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 DNAJC7Q99615 494 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 HEBP1Q9NRV9 189 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 ADAM22Q9P0K1 906 aa25.91■■□□□ 1.74
USP48-214ENST00000532737 BZW2Q9Y6E2 419 aaKnown RBP25.91■■□□□ 1.74
USP48-214ENST00000532737 OTOL1A6NHN0 477 aaPredicted RBP25.9■■□□□ 1.74
USP48-214ENST00000532737 KLKB1P03952 638 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 TPM1P09493 284 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 SCNN1AP37088 669 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 ADKP55263 362 aaKnown RBP25.9■■□□□ 1.74
USP48-214ENST00000532737 PITX1P78337 314 aaPredicted RBP25.9■■□□□ 1.74
USP48-214ENST00000532737 RUNX3Q13761 415 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 DCAF6Q58WW2 860 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 FAM102AQ5T9C2 384 aaPredicted RBP25.9■■□□□ 1.74
USP48-214ENST00000532737 MON1BQ7L1V2 547 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 BBS7Q8IWZ6 715 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 ADAM32Q8TC27 787 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 CSGALNACT1Q8TDX6 532 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 PBXIP1Q96AQ6 731 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 ARHGEF3Q9NR81 526 aa25.9■■□□□ 1.74
USP48-214ENST00000532737 HBS1LQ9Y450 684 aaKnown RBP25.9■■□□□ 1.74
USP48-214ENST00000532737 TMCO5BA8MYB1 307 aa25.89■■□□□ 1.74
USP48-214ENST00000532737 SLC9A3R1O14745 358 aaPredicted RBP25.89■■□□□ 1.74
USP48-214ENST00000532737 MFAP3LO75121 409 aa25.89■■□□□ 1.74
USP48-214ENST00000532737 RNASE9P60153 205 aaKnown RBP25.89■■□□□ 1.74
USP48-214ENST00000532737 TRIP4Q15650 581 aaPredicted RBP25.89■■□□□ 1.74
USP48-214ENST00000532737 MLF2Q15773 248 aaPredicted RBP25.89■■□□□ 1.74
USP48-214ENST00000532737 WDR59Q6PJI9 974 aa25.89■■□□□ 1.74
USP48-214ENST00000532737 TAC4Q86UU9 113 aa25.89■■□□□ 1.74
USP48-214ENST00000532737 ADGRG2Q8IZP9 1017 aa25.89■■□□□ 1.74
USP48-214ENST00000532737 ARHGAP20Q9P2F6 1191 aa25.89■■□□□ 1.74
USP48-214ENST00000532737 TBC1D14Q9P2M4 693 aa25.89■■□□□ 1.74
USP48-214ENST00000532737 LSM7Q9UK45 103 aaKnown RBP25.89■■□□□ 1.74
USP48-214ENST00000532737 KIF26AQ9ULI4 1882 aaPredicted RBP25.88■■□□□ 1.73
USP48-214ENST00000532737 DAB1O75553 588 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 PDGFBP01127 241 aaPredicted RBP25.88■■□□□ 1.73
USP48-214ENST00000532737 CALB1P05937 261 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 SOX9P48436 509 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 C1QBPQ07021 282 aaKnown RBP25.88■■□□□ 1.73
USP48-214ENST00000532737 ITPRIPL2Q3MIP1 535 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 Q6ZNB5 142 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 DNAAF5Q86Y56 855 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 DRC7Q8IY82 874 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 PRSS33Q8NF86 280 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 ECT2Q9H8V3 914 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 ABHD10Q9NUJ1 306 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 TMEM59LQ9UK28 342 aa25.88■■□□□ 1.73
USP48-214ENST00000532737 SHISA7A6NL88 538 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 AKR1B15C9JRZ8 316 aaPredicted RBP25.87■■□□□ 1.73
USP48-214ENST00000532737 CORO1AP31146 461 aaKnown RBP25.87■■□□□ 1.73
USP48-214ENST00000532737 KPNA1P52294 538 aaPredicted RBP25.87■■□□□ 1.73
USP48-214ENST00000532737 MCOLN2Q8IZK6 566 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 ATP2A3Q93084 1043 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 PLD4Q96BZ4 506 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.87■■□□□ 1.73
USP48-214ENST00000532737 WDR35Q9P2L0 1181 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 ADAMTS1Q9UHI8 967 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 PIAS3Q9Y6X2 628 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 CACNA1HO95180 2353 aa25.87■■□□□ 1.73
USP48-214ENST00000532737 GJB6O95452 261 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 TRUB2O95900 331 aaKnown RBP25.86■■□□□ 1.73
USP48-214ENST00000532737 IGLV3-25P01717 112 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 IGLV3-27P01718 113 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 GZMAP12544 262 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 NOS2P35228 1153 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 MATKP42679 507 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 TBX4P57082 545 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 CDK17Q00537 523 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 PRKCQQ04759 706 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 TRNP1Q6NT89 227 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 TPRG1Q6ZUI0 275 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 CPA6Q8N4T0 437 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 FBXL6Q8N531 539 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 SERPINB11Q96P15 392 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 DCLK3Q9C098 648 aa25.86■■□□□ 1.73
USP48-214ENST00000532737 METTL5Q9NRN9 209 aaKnown RBP25.86■■□□□ 1.73
USP48-214ENST00000532737 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.86■■□□□ 1.73
USP48-214ENST00000532737 COL4A2P08572 1712 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 COL4A3Q01955 1670 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 ADCY5O95622 1261 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 NFATC1O95644 943 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 FTLP02792 175 aaPredicted RBP25.85■■□□□ 1.73
USP48-214ENST00000532737 FLT3P36888 993 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 EIF4A3P38919 411 aaKnown RBP25.85■■□□□ 1.73
USP48-214ENST00000532737 MLLT6P55198 1093 aaPredicted RBP25.85■■□□□ 1.73
USP48-214ENST00000532737 GSCP56915 257 aaPredicted RBP25.85■■□□□ 1.73
USP48-214ENST00000532737 DHCR24Q15392 516 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 TSR1Q2NL82 804 aaKnown RBP25.85■■□□□ 1.73
USP48-214ENST00000532737 PPP1R2P3Q6NXS1 205 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 RHBDF2Q6PJF5 856 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 DENND1CQ8IV53 801 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 CNGA4Q8IV77 575 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 OTUB2Q96DC9 234 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 SLC39A13Q96H72 371 aa25.85■■□□□ 1.73
USP48-214ENST00000532737 FCRL2Q96LA5 508 aaPredicted RBP25.85■■□□□ 1.73
USP48-214ENST00000532737 ZNHIT6Q9NWK9 470 aaKnown RBP25.85■■□□□ 1.73
USP48-214ENST00000532737 AGO1Q9UL18 857 aaKnown RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms