RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 AGPAT3Q9NRZ7 376 aa7.51□□□□□ -1.21
TRIM53CP-201ENST00000531490 HSPBP1Q9NZL4 362 aa7.51□□□□□ -1.21
TRIM53CP-201ENST00000531490 USP25Q9UHP3 1055 aa7.51□□□□□ -1.21
TRIM53CP-201ENST00000531490 GCN1Q92616 2671 aaKnown RBP7.51□□□□□ -1.21
TRIM53CP-201ENST00000531490 LAMA1P25391 3075 aa7.51□□□□□ -1.21
TRIM53CP-201ENST00000531490 DMXL2Q8TDJ6 3036 aa7.51□□□□□ -1.21
TRIM53CP-201ENST00000531490 NBEAQ8NFP9 2946 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 GOLGA6L4A6NEF3 574 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 ZNF233A6NK53 670 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 KIAA1324LA8MWY0 1029 aaPredicted RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 ARNTLO00327 626 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 PRRG1O14668 218 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 RHOBTB3O94955 611 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 LDHAP00338 332 aaKnown RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 CST3P01034 146 aaPredicted RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 LRG1P02750 347 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 PTPN2P17706 415 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 PSMC3P17980 439 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 AARSP49588 968 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 CYP2J2P51589 502 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 TFAMQ00059 246 aaKnown RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 POU5F1Q01860 360 aaKnown RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 ROR1Q01973 937 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 PSMD2Q13200 908 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 PPP2R5DQ14738 602 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 TEAD2Q15562 447 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 BMT2Q1RMZ1 405 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 ISM2Q6H9L7 571 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 PKN3Q6P5Z2 889 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 SEZ6L2Q6UXD5 910 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 UNQ6494/PRO21346Q6UXR6 183 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 KBTBD6Q86V97 674 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 BRSK2Q8IWQ3 736 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 SMYD4Q8IYR2 804 aaPredicted RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 GPD1LQ8N335 351 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 SPEM1Q8N4L4 309 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 BEST2Q8NFU1 509 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 ZSCAN18Q8TBC5 510 aaPredicted RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 GRIN3AQ8TCU5 1115 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 PLEKHO2Q8TD55 490 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 SMARCD2Q92925 531 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 ZFYVE19Q96K21 471 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 SENP8Q96LD8 212 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 LRRC3BQ96PB8 259 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 TMEM209Q96SK2 561 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 DUSP9Q99956 384 aaKnown RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 KCTD10Q9H3F6 313 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 CYP4F11Q9HBI6 524 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 EXOC1Q9NV70 894 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 CACNA2D2Q9NY47 1150 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 RBAKQ9NYW8 714 aaPredicted RBP7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 CEP72Q9P209 647 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 SIX4Q9UIU6 781 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 FBXL5Q9UKA1 691 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 DERAQ9Y315 318 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 C2CD2Q9Y426 696 aa7.5□□□□□ -1.21
TRIM53CP-201ENST00000531490 ARHGEF37A1IGU5 675 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 HEPACAM2A8MVW5 462 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ZNF263O14978 683 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ABLIM3O94929 683 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 OAZ2O95190 189 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 IL18RAPO95256 599 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 VNN2O95498 520 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ITGB3P05106 788 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 OR4Q2P0C623 313 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ZNF806P0C7X5 589 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 MYL4P12829 197 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 GRIK1P39086 918 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 CASP4P49662 377 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 LIMK1P53667 647 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 SNRNP35Q16560 246 aaKnown RBP7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 CTXN3Q4LDR2 81 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 STXBP5Q5T5C0 1151 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 SLC8B1Q6J4K2 584 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 DSTYKQ6XUX3 929 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ANKS3Q6ZW76 656 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 STXBP4Q6ZWJ1 553 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 PDZD4Q76G19 769 aaPredicted RBP7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 CSGALNACT2Q8N6G5 542 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 GIMAP7Q8NHV1 300 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ZNF461Q8TAF7 563 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 GPBAR1Q8TDU6 330 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 DDX1Q92499 740 aaKnown RBP7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ELMO3Q96BJ8 720 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 CCDC127Q96BQ5 260 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 EEF2KMTQ96G04 330 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 TSPAN18Q96SJ8 248 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 LSM14BQ9BX40 385 aaKnown RBP7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 OSBPL1AQ9BXW6 950 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 MTMR12Q9C0I1 747 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 ATXN3LQ9H3M9 355 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 C1GALT1Q9NS00 363 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 INTS13Q9NVM9 706 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 DMAC2Q9NW81 257 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 CHMP5Q9NZZ3 219 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 AGAP1Q9UPQ3 857 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 PCDHA5Q9Y5H7 936 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 BACE2Q9Y5Z0 518 aa7.49□□□□□ -1.21
TRIM53CP-201ENST00000531490 FREM2Q5SZK8 3169 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms