RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CACNA2D4Q7Z3S7 1137 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 TMEM25Q86YD3 366 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 SYNPOQ8N3V7 929 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 CD101Q93033 1021 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 FAM149B1Q96BN6 582 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 PLD4Q96BZ4 506 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 TRIM62Q9BVG3 475 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 CHRDQ9H2X0 955 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 SPHK2Q9NRA0 654 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 RBM12Q9NTZ6 932 aaKnown RBP13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 NAALADL1Q9UQQ1 740 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 WDFY4Q6ZS81 3184 aa13.24□□□□□ -0.29
CCDC90B-216ENST00000529856 HOXC11O43248 304 aaPredicted RBP13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 ERBB2P04626 1255 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 GLI1P08151 1106 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 ADH5P11766 374 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 DRD1P21728 446 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 CORO1AP31146 461 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 GABRB2P47870 512 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 SLC6A11P48066 632 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 UBASH3AP57075 661 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 FMO1Q01740 532 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 CDR2Q01850 454 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 TAF5Q15542 800 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 EFHC1Q5JVL4 640 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 SYPL2Q5VXT5 272 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 OR6B2Q6IFH4 312 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 MAMSTRQ6ZN01 415 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 ERICH1Q86X53 443 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 C1orf210Q8IVY1 113 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 SLC20A1Q8WUM9 679 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 BAP1Q92560 729 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 PIWIL1Q96J94 861 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 IER2Q9BTL4 223 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 TSPY26PQ9H489 355 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 POPDC2Q9HBU9 364 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 SPATA6Q9NWH7 488 aaPredicted RBP13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 ASNSD1Q9NWL6 643 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 AGO1Q9UL18 857 aaKnown RBP13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
CCDC90B-216ENST00000529856 CAPN9O14815 690 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 MSI1O43347 362 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 EGFP01133 1207 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 IGLV3-27P01718 113 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 CYP1A1P04798 512 aaPredicted RBP13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 CHKAP35790 457 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 EIF2DP41214 584 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 HARS2P49590 506 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 PTPN5P54829 565 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 NOMO3P69849 1222 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 SLC6A3Q01959 620 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 ARID5AQ03989 594 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 MTAPQ13126 283 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 GAS6Q14393 721 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 ANGPT1Q15389 498 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 OLFML1Q6UWY5 402 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 FAM183BPQ6ZVS7 135 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 IRF2BP2Q7Z5L9 587 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 DENND1CQ8IV53 801 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 ZNF397Q8NF99 534 aaPredicted RBP13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 IPO4Q8TEX9 1081 aaKnown RBP13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 CPA5Q8WXQ8 436 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 C18orf8Q96DM3 657 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 SLC2A13Q96QE2 648 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 IRF2BPLQ9H1B7 796 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 SYNCQ9H7C4 482 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 MARK1Q9P0L2 795 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 CACNA1IQ9P0X4 2223 aa13.22□□□□□ -0.29
CCDC90B-216ENST00000529856 A0A0A0MRY4 1105 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 H0Y858 1186 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 HSF2BPO75031 334 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 CCDC172P0C7W6 258 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 FERP16591 822 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 PBX1P40424 430 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 TBX4P57082 545 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 RING1Q06587 406 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 NNTQ13423 1086 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 ANO4Q32M45 955 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 FBXO43Q4G163 708 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 NAA35Q5VZE5 725 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 TRIM72Q6ZMU5 477 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 Q6ZS52 159 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 TPGS1Q6ZTW0 290 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 TOGARAM2Q6ZUX3 1019 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 SLC26A9Q7LBE3 791 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 TAC4Q86UU9 113 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 C12orf40Q86WS4 652 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 UNC45BQ8IWX7 931 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 FAM217AQ8IXS0 508 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 MAML2Q8IZL2 1156 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 DEFB106AQ8N104 65 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 CPXM2Q8N436 756 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 SPEM1Q8N4L4 309 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 EZH1Q92800 747 aaPredicted RBP13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 SERPINB11Q96P15 392 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms