RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 PRRT4C9JH25 899 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 MDM4O15151 490 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 NDUFS2O75306 463 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 STC2O76061 302 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 CYBBP04839 570 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 PROS1P07225 676 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 EPB41P11171 864 aaKnown RBP16.42■□□□□ 0.22
CTSB-215ENST00000528965 ZNF33AQ06730 810 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 SYCP2LQ5T4T6 812 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 PPP1R26Q5T8A7 1209 aaPredicted RBP16.42■□□□□ 0.22
CTSB-215ENST00000528965 UNQ6494/PRO21346Q6UXR6 183 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 KRBA2Q6ZNG9 492 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 FBXL13Q8NEE6 735 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 BHMTQ93088 406 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 HEXIM2Q96MH2 286 aaKnown RBP16.42■□□□□ 0.22
CTSB-215ENST00000528965 GTPBP2Q9BX10 602 aaKnown RBP16.42■□□□□ 0.22
CTSB-215ENST00000528965 NUDT5Q9UKK9 219 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 CYP8B1Q9UNU6 501 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 MAPK8IP1Q9UQF2 711 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 USP3Q9Y6I4 520 aa16.42■□□□□ 0.22
CTSB-215ENST00000528965 TNRC6BQ9UPQ9 1833 aaKnown RBP16.42■□□□□ 0.22
CTSB-215ENST00000528965 TMEM8BA6NDV4 472 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 UPK3BL1B0FP48 263 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 UPK3BL2E5RIL1 263 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 OPHN1O60890 802 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 SYPP08247 313 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 RDXP35241 583 aaKnown RBP16.41■□□□□ 0.22
CTSB-215ENST00000528965 ZNF132P52740 706 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 ZNF394Q53GI3 561 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 KIAA1324Q6UXG2 1013 aaKnown RBP16.41■□□□□ 0.22
CTSB-215ENST00000528965 TOGARAM2Q6ZUX3 1019 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 SCD5Q86SK9 330 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 FOXJ1Q92949 421 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 HSPA12BQ96MM6 686 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 ACOX2Q99424 681 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 ADAM33Q9BZ11 813 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 CACNA2D2Q9NY47 1150 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 HCN2Q9UL51 889 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 SLC27A6Q9Y2P4 619 aa16.41■□□□□ 0.22
CTSB-215ENST00000528965 CETN3O15182 167 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 PENKP01210 267 aaPredicted RBP16.4■□□□□ 0.22
CTSB-215ENST00000528965 CISD3P0C7P0 127 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 GNSP15586 552 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 CORO1AP31146 461 aaKnown RBP16.4■□□□□ 0.22
CTSB-215ENST00000528965 EFEMP1Q12805 493 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 ZCWPW2Q504Y3 356 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 WDR45BQ5MNZ6 344 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 KIAA1211LQ6NV74 962 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 ANKS1BQ7Z6G8 1248 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 TRIML1Q8N9V2 468 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 TMEM176AQ96HP8 235 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 MRGPRX1Q96LB2 322 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 CAPN10Q9HC96 672 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 RMND1Q9NWS8 449 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 RAB20Q9NX57 234 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 PLK2Q9NYY3 685 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 MARCH2Q9P0N8 246 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 RAD54BQ9Y620 910 aa16.4■□□□□ 0.22
CTSB-215ENST00000528965 MYO18AQ92614 2054 aaKnown RBP16.4■□□□□ 0.22
CTSB-215ENST00000528965 ARHGAP33O14559 1287 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 YWHAGP61981 247 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTSB-215ENST00000528965 YWHAEP62258 255 aaKnown RBP16.39■□□□□ 0.21
CTSB-215ENST00000528965 SEMA3BQ13214 749 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 HNRNPDQ14103 355 aaKnown RBP16.39■□□□□ 0.21
CTSB-215ENST00000528965 EIF4HQ15056 248 aaKnown RBP16.39■□□□□ 0.21
CTSB-215ENST00000528965 ARHGAP17Q68EM7 881 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 RGL4Q8IZJ4 473 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 DEFB119Q8N690 84 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 PLD4Q96BZ4 506 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 TSG101Q99816 390 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 CD248Q9HCU0 757 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 OLA1Q9NTK5 396 aaKnown RBP16.39■□□□□ 0.21
CTSB-215ENST00000528965 FBXO10Q9UK96 956 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 STON1Q9Y6Q2 735 aa16.39■□□□□ 0.21
CTSB-215ENST00000528965 LAMA1P25391 3075 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 MEI4A8MW99 385 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 H0Y626 953 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 SYNCRIPO60506 623 aaKnown RBP16.38■□□□□ 0.21
CTSB-215ENST00000528965 ZNF202O95125 648 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 TRIM16O95361 564 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 HMBSP08397 361 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 CD6P30203 668 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 BCAT1P54687 386 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 MFAP3P55082 362 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 MCCD1P59942 119 aaPredicted RBP16.38■□□□□ 0.21
CTSB-215ENST00000528965 ARID5AQ03989 594 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 TCERG1LQ5VWI1 586 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 METTL3Q86U44 580 aaKnown RBP16.38■□□□□ 0.21
CTSB-215ENST00000528965 PIGZQ86VD9 579 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 SLC41A1Q8IVJ1 513 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 CPXM2Q8N436 756 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 MINDY1Q8N5J2 469 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 ANKRD52Q8NB46 1076 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 SLC4A11Q8NBS3 891 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 PRDM16Q9HAZ2 1276 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 HESX1Q9UBX0 185 aa16.38■□□□□ 0.21
CTSB-215ENST00000528965 ASCC3Q8N3C0 2202 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms