RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 PNKPQ96T60 521 aa13.98□□□□□ -0.17
CAPN1-215ENST00000528396 ARHGEF4Q9NR80 690 aa13.98□□□□□ -0.17
CAPN1-215ENST00000528396 DEC1Q9P2X7 70 aa13.98□□□□□ -0.17
CAPN1-215ENST00000528396 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
CAPN1-215ENST00000528396 FBXO4Q9UKT5 387 aa13.98□□□□□ -0.17
CAPN1-215ENST00000528396 ZFHX2Q9C0A1 2572 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-215ENST00000528396 WDFY4Q6ZS81 3184 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 RNF40O75150 1001 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 SOX5P35711 763 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 EIF2DP41214 584 aaKnown RBP13.97□□□□□ -0.17
CAPN1-215ENST00000528396 YWHAZP63104 245 aaKnown RBP13.97□□□□□ -0.17
CAPN1-215ENST00000528396 ARID5AQ03989 594 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 KDSRQ06136 332 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-215ENST00000528396 OR6B2Q6IFH4 312 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 Q6ZS52 159 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 TMEM110Q86TL2 294 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 NAT16Q8N8M0 369 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 BHMTQ93088 406 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 SERPINB11Q96P15 392 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 ERGIC2Q96RQ1 377 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 FUCA2Q9BTY2 467 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 HSD3B7Q9H2F3 369 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 POPDC2Q9HBU9 364 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 CBX8Q9HC52 389 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 DNAJC17Q9NVM6 304 aaKnown RBP13.97□□□□□ -0.17
CAPN1-215ENST00000528396 CYTH4Q9UIA0 394 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 SIK3Q9Y2K2 1263 aa13.97□□□□□ -0.17
CAPN1-215ENST00000528396 CACNA1IQ9P0X4 2223 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 TBC1D3BA6NDS4 549 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 HOXC11O43248 304 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 PAPSS1O43252 624 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 GABBR2O75899 941 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 KAT7O95251 611 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 LSM8O95777 96 aaKnown RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 SP9P0CG40 484 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 OPRD1P41143 372 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 GRIA2P42262 883 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 SLC6A11P48066 632 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 RPL34P49207 117 aaKnown RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 SLC11A2P49281 568 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 NRLP54845 237 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 SEC13P55735 322 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 TBX4P57082 545 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 TRIP4Q15650 581 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 EFHC1Q5JVL4 640 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 NUGGCQ68CJ6 796 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 GRAMD4Q6IC98 578 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 MSANTD2Q6P1R3 559 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 Q6ZNB5 142 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 NOP9Q86U38 636 aaKnown RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 LUZP1Q86V48 1076 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 ZNF677Q86XU0 584 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 UNC45BQ8IWX7 931 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 ACDQ96AP0 544 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 CPXM1Q96SM3 734 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 FAM204AQ9H8W3 233 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 FBRSL1Q9HCM7 1045 aaKnown RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 SEPT11Q9NVA2 429 aaKnown RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 AGO1Q9UL18 857 aaKnown RBP13.96□□□□□ -0.17
CAPN1-215ENST00000528396 SLC8A2Q9UPR5 921 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 NAALADL1Q9UQQ1 740 aa13.96□□□□□ -0.17
CAPN1-215ENST00000528396 EPHB6O15197 1021 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 GREM1O60565 184 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 HSF2BPO75031 334 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 TULP3O75386 442 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 KLKB1P03952 638 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 GLI1P08151 1106 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 TYRP14679 529 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 CDK17Q00537 523 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 SATB1Q01826 763 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 IQCB1Q15051 598 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 ZNF528Q3MIS6 628 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 C2orf27AQ580R0 203 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 TSSK4Q6SA08 328 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 APTXQ7Z2E3 356 aaKnown RBP13.95□□□□□ -0.18
CAPN1-215ENST00000528396 ERICH1Q86X53 443 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 ZDHHC17Q8IUH5 632 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 WDTC1Q8N5D0 677 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 ADAM32Q8TC27 787 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 EPS8L1Q8TE68 723 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 DQX1Q8TE96 717 aaKnown RBP13.95□□□□□ -0.18
CAPN1-215ENST00000528396 DDI1Q8WTU0 396 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 RNF34Q969K3 372 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 DDX50Q9BQ39 737 aaKnown RBP13.95□□□□□ -0.18
CAPN1-215ENST00000528396 FAM126AQ9BYI3 521 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-215ENST00000528396 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
CAPN1-215ENST00000528396 PRMT8Q9NR22 394 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-215ENST00000528396 MARK1Q9P0L2 795 aa13.95□□□□□ -0.18
CAPN1-215ENST00000528396 FAM170AA1A519 330 aa13.94□□□□□ -0.18
CAPN1-215ENST00000528396 TYW5A2RUC4 315 aaKnown RBP13.94□□□□□ -0.18
CAPN1-215ENST00000528396 GRAP2O75791 330 aa13.94□□□□□ -0.18
CAPN1-215ENST00000528396 LATS1O95835 1130 aa13.94□□□□□ -0.18
CAPN1-215ENST00000528396 APOEP02649 317 aa13.94□□□□□ -0.18
CAPN1-215ENST00000528396 ERBB2P04626 1255 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms