RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TSC2P49815 1807 aa18.22■□□□□ 0.51
USH1C-205ENST00000527020 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 CD4P01730 458 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 T-ENOLP0DO92 83 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 KCNE1P15382 129 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 NCBP2-AS2Q69YL0 99 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 KCNT2Q6UVM3 1135 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 CHSY1Q86X52 802 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 PYROXD2Q8N2H3 581 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 PPM1NQ8N819 430 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 SIGLEC10Q96LC7 697 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 MANSC1Q9H8J5 431 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 TXLNGQ9NUQ3 528 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 GLTPD2A6NH11 291 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 C2CD2LO14523 706 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 DCTN3O75935 186 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 UNC5AQ6ZN44 842 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 CDHR3Q6ZTQ4 885 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 MPP5Q8N3R9 675 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 RFWD2Q8NHY2 731 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 NDRG1Q92597 394 aaKnown RBP18.21■□□□□ 0.51
USH1C-205ENST00000527020 FAM111AQ96PZ2 611 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 DTLQ9NZJ0 730 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 ZNF180Q9UJW8 692 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 NR2E3Q9Y5X4 410 aa18.21■□□□□ 0.51
USH1C-205ENST00000527020 TRDMT1O14717 391 aaKnown RBP18.2■□□□□ 0.5
USH1C-205ENST00000527020 UGT1A9O60656 530 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 ECM2O94769 699 aaPredicted RBP18.2■□□□□ 0.5
USH1C-205ENST00000527020 ZFXP17010 805 aaPredicted RBP18.2■□□□□ 0.5
USH1C-205ENST00000527020 TPSB2P20231 275 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 AMPD1P23109 780 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 TARSP26639 723 aaKnown RBP18.2■□□□□ 0.5
USH1C-205ENST00000527020 AXLP30530 894 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 ALDH3A1P30838 453 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 SLC8A1P32418 973 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 GRIA1P42261 906 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 NR2C2P49116 596 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 OVGP1Q12889 678 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 MFSD10Q14728 455 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 E2F5Q15329 346 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 TPSAB1Q15661 275 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 TTC39BQ5VTQ0 682 aaPredicted RBP18.2■□□□□ 0.5
USH1C-205ENST00000527020 OTUD1Q5VV17 481 aaPredicted RBP18.2■□□□□ 0.5
USH1C-205ENST00000527020 OLFML2BQ68BL8 750 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 C4orf22Q6V702 233 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 NLRP9Q7RTR0 991 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 OSTM1Q86WC4 334 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 LRRC6Q86X45 466 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 CEP57Q86XR8 500 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 ARRDC4Q8NCT1 418 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 HSFY1Q96LI6 401 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 ZNF560Q96MR9 790 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 LRMDAQ9H2I8 198 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 SNX25Q9H3E2 840 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 UGT1A7Q9HAW7 530 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 UGT1A10Q9HAW8 530 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 UGT1A8Q9HAW9 530 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.2■□□□□ 0.5
USH1C-205ENST00000527020 TRIM49D1C9J1S8 452 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 TREHO43280 583 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 APOEP02649 317 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 VAV1P15498 845 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 GOT1P17174 413 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 ACADSBP45954 432 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 STRADAQ7RTN6 431 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 CTAGE3PQ8IX95 158 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 VPS52Q8N1B4 723 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 ZNF398Q8TD17 642 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 LRRC39Q96DD0 335 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 OLFM3Q96PB7 478 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 TMEM237Q96Q45 408 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 HAO1Q9UJM8 370 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 STK38LQ9Y2H1 464 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 DNAH12Q6ZR08 3092 aa18.2■□□□□ 0.5
USH1C-205ENST00000527020 DGKIO75912 1065 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 CSH1P0DML2 217 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 CSH2P0DML3 217 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 TAF6P49848 677 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 PITX1P78337 314 aaPredicted RBP18.19■□□□□ 0.5
USH1C-205ENST00000527020 FYB2Q5VWT5 728 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 TRMT10BQ6PF06 316 aaKnown RBP18.19■□□□□ 0.5
USH1C-205ENST00000527020 APPL2Q8NEU8 664 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 AGAP11Q8TF27 550 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 SLC7A6OSQ96CW6 309 aaPredicted RBP18.19■□□□□ 0.5
USH1C-205ENST00000527020 PARK7Q99497 189 aaKnown RBP18.19■□□□□ 0.5
USH1C-205ENST00000527020 FLRT1Q9NZU1 646 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 FZD10Q9ULW2 581 aa18.19■□□□□ 0.5
USH1C-205ENST00000527020 HAS3O00219 553 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 RFPL1O75677 317 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 PNPLA4P41247 253 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 MATKP42679 507 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 SEMA5AQ13591 1074 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 PRKD1Q15139 912 aaPredicted RBP18.18■□□□□ 0.5
USH1C-205ENST00000527020 PIGZQ86VD9 579 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 FAM131BQ86XD5 332 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 ADGRF2Q8IZF7 708 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 DEFB106AQ8N104 65 aa18.18■□□□□ 0.5
USH1C-205ENST00000527020 SMG8Q8ND04 991 aaKnown RBP18.18■□□□□ 0.5
USH1C-205ENST00000527020 TBC1D31Q96DN5 1066 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms