RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 C5orf42Q9H799 3197 aa17.24■□□□□ 0.35
CAPN1-205ENST00000526954 MDM4O15151 490 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 ENDOD1O94919 500 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 CCDC175P0C221 793 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 SDC4P31431 198 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 GBP1P32455 592 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 KPNA1P52294 538 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-205ENST00000526954 HADHBP55084 474 aaKnown RBP17.23■□□□□ 0.35
CAPN1-205ENST00000526954 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-205ENST00000526954 COG7P83436 770 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 OGDHQ02218 1023 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 FAM78AQ5JUQ0 283 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 OTUD1Q5VV17 481 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-205ENST00000526954 ZNF662Q6ZS27 426 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 TAC4Q86UU9 113 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 USP13Q92995 863 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-205ENST00000526954 CFAP57Q96MR6 1250 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 SERPINB11Q96P15 392 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 CNPY3Q9BT09 278 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 TRIM7Q9C029 511 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 KIF9Q9HAQ2 790 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 TDP1Q9NUW8 608 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 RASAL2Q9UJF2 1139 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 TFR2Q9UP52 801 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 TLR6Q9Y2C9 796 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 NR2E1Q9Y466 385 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 COL6A3P12111 3177 aa17.23■□□□□ 0.35
CAPN1-205ENST00000526954 M0QYT0 321 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 IRAK2O43187 625 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 F9P00740 461 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 IL9P15248 144 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 TFE3P19532 575 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-205ENST00000526954 SULT1E1P49888 294 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 ZXDBP98169 803 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 RING1Q06587 406 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 ZNF252P-AS1Q0IIN9 211 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 KIF5AQ12840 1032 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 ACAP1Q15027 740 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 TRIP4Q15650 581 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-205ENST00000526954 STRADAQ7RTN6 431 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 DDX42Q86XP3 938 aaKnown RBP eCLIP17.22■□□□□ 0.35
CAPN1-205ENST00000526954 PLCD3Q8N3E9 789 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 KIAA1958Q8N8K9 716 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 ATXN2LQ8WWM7 1075 aaKnown RBP17.22■□□□□ 0.35
CAPN1-205ENST00000526954 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 SLC39A13Q96H72 371 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 CALR3Q96L12 384 aaKnown RBP17.22■□□□□ 0.35
CAPN1-205ENST00000526954 TBCBQ99426 244 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 ADAM33Q9BZ11 813 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 OSGEPQ9NPF4 335 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 OBP2AQ9NY56 170 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 IP6K2Q9UHH9 426 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 ANAPC7Q9UJX3 599 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 CPQQ9Y646 472 aa17.22■□□□□ 0.35
CAPN1-205ENST00000526954 SLC12A8A0AV02 714 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 MYO1FO00160 1098 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 PRAMEF12O95522 483 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 IGLV3-27P01718 113 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 DESP17661 470 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 FCARP24071 287 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 ARHGAP25P42331 645 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 PIGHQ14442 188 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-205ENST00000526954 MIB1Q86YT6 1006 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 ZDHHC14Q8IZN3 488 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 CELF5Q8N6W0 485 aaKnown RBP17.21■□□□□ 0.35
CAPN1-205ENST00000526954 NIPA2Q8N8Q9 360 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 TDRD5Q8NAT2 981 aaKnown RBP17.21■□□□□ 0.35
CAPN1-205ENST00000526954 ADAM32Q8TC27 787 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 ADAMTS19Q8TE59 1207 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 PLD4Q96BZ4 506 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 TSGA10Q9BZW7 698 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 SMG9Q9H0W8 520 aaKnown RBP17.21■□□□□ 0.35
CAPN1-205ENST00000526954 FAM204AQ9H8W3 233 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 GKN1Q9NS71 199 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 DDIT4Q9NX09 232 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 SMPD4Q9NXE4 827 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 CALCOCO1Q9P1Z2 691 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 CCL26Q9Y258 94 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 PPP2R2CQ9Y2T4 447 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 DUSP10Q9Y6W6 482 aa17.21■□□□□ 0.35
CAPN1-205ENST00000526954 SPTBN5Q9NRC6 3674 aaKnown RBP17.21■□□□□ 0.35
CAPN1-205ENST00000526954 C2CD4DB7Z1M9 353 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 ANHXE9PGG2 379 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 LEFTY2O00292 366 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 CCP110O43303 1012 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 MSI1O43347 362 aaKnown RBP17.2■□□□□ 0.34
CAPN1-205ENST00000526954 STC2O76061 302 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 PSMA2P25787 234 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 RDXP35241 583 aaKnown RBP17.2■□□□□ 0.34
CAPN1-205ENST00000526954 CXCR3P49682 368 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 KCNQ1P51787 676 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 TBX4P57082 545 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 ATP11AP98196 1134 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 USP4Q13107 963 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 ZNF77Q15935 545 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 C15orf59Q2T9L4 293 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-205ENST00000526954 MTSS1LQ765P7 747 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 ELSPBP1Q96BH3 223 aa17.2■□□□□ 0.34
CAPN1-205ENST00000526954 FCRL2Q96LA5 508 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms