RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RNASE9P60153 205 aaKnown RBP13.49□□□□□ -0.25
SMPD1-202ENST00000526280 CDK17Q00537 523 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 TNK2Q07912 1038 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 SIGLEC14Q08ET2 396 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 TRIP4Q15650 581 aaPredicted RBP13.49□□□□□ -0.25
SMPD1-202ENST00000526280 SLC44A4Q53GD3 710 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 HS1BP3Q53T59 392 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 DCAF6Q58WW2 860 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 IER5LQ5T953 404 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 FAM102AQ5T9C2 384 aaPredicted RBP13.49□□□□□ -0.25
SMPD1-202ENST00000526280 TRIM68Q6AZZ1 485 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 TRIM67Q6ZTA4 783 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 VPS36Q86VN1 386 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 MCOLN2Q8IZK6 566 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 ADGRG2Q8IZP9 1017 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 TC2NQ8N9U0 490 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMPD1-202ENST00000526280 EBF3Q9H4W6 596 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 HPS4Q9NQG7 708 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 TMEM59LQ9UK28 342 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 TECTAO75443 2155 aa13.49□□□□□ -0.25
SMPD1-202ENST00000526280 A0A087X0T9 212 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 ESPNB1AK53 854 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 SCAMP3O14828 347 aaKnown RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 MSI1O43347 362 aaKnown RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 RTN2O75298 545 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 IGLV3-25P01717 112 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 IGLV3-27P01718 113 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 FTLP02792 175 aaPredicted RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 KLKB1P03952 638 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 HMBSP08397 361 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 FAM228BP0C875 321 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 ARSAP15289 507 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 CDC25BP30305 580 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 NOS2P35228 1153 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 EIF4A3P38919 411 aaKnown RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 IFNAR2P48551 515 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 MLLT6P55198 1093 aaPredicted RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 RING1Q06587 406 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 MAPK8IP2Q13387 824 aaPredicted RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 NNTQ13423 1086 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 EIF4EBP2Q13542 120 aaPredicted RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 RUNX3Q13761 415 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 ASTE1Q2TB18 679 aaPredicted RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 EML3Q32P44 896 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 Q6ZNB5 142 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 TAC4Q86UU9 113 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 BBS7Q8IWZ6 715 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 ADAM32Q8TC27 787 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 ATP2A3Q93084 1043 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 PLD4Q96BZ4 506 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 OTUB2Q96DC9 234 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 SERPINB11Q96P15 392 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 DCLK3Q9C098 648 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 ISCUQ9H1K1 167 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 RRN3Q9NYV6 651 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 GTSE1Q9NYZ3 720 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 LSM7Q9UK45 103 aaKnown RBP13.48□□□□□ -0.25
SMPD1-202ENST00000526280 FBXL21Q9UKT6 434 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 F5P12259 2224 aa13.48□□□□□ -0.25
SMPD1-202ENST00000526280 SSU72P8A0A1W2PR75 194 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 TCRBV5S1A1TA0A578 114 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 KRBA1A5PL33 1030 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 OTOL1A6NHN0 477 aaPredicted RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 IRAK2O43187 625 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 TRUB2O95900 331 aaKnown RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 KRT3P12035 628 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 GLULP15104 373 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 RRM1P23921 792 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 CORO1AP31146 461 aaKnown RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 FLT3P36888 993 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 HARS2P49590 506 aaKnown RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 TBX4P57082 545 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 PITX1P78337 314 aaPredicted RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 ITPRIPL2Q3MIP1 535 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 TRNP1Q6NT89 227 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 DNAAF5Q86Y56 855 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 C3orf20Q8ND61 904 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 CSGALNACT1Q8TDX6 532 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 NT5C3BQ969T7 300 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 SLC39A13Q96H72 371 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 NPY6RQ99463 290 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 CHP1Q99653 195 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 DDX23Q9BUQ8 820 aaKnown RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 ARHGEF3Q9NR81 526 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 METTL5Q9NRN9 209 aaKnown RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 HEBP1Q9NRV9 189 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 AGO1Q9UL18 857 aaKnown RBP13.47□□□□□ -0.25
SMPD1-202ENST00000526280 CA14Q9ULX7 337 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 TLR6Q9Y2C9 796 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 ZNF510Q9Y2H8 683 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 TICRRQ7Z2Z1 1910 aa13.47□□□□□ -0.25
SMPD1-202ENST00000526280 COL4A2P08572 1712 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 FAM86C2PA6NEL3 165 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 TMEM221A6NGB7 291 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 SIGLEC16A6NMB1 481 aa13.46□□□□□ -0.25
SMPD1-202ENST00000526280 M0R296 226 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms