RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 AKR1B10O60218 316 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 IGLV3-27P01718 113 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 PFKPQ01813 784 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 EIF4EBP2Q13542 120 aaPredicted RBP21.65■■□□□ 1.06
CD44-222ENST00000526025 TRIP4Q15650 581 aaPredicted RBP21.65■■□□□ 1.06
CD44-222ENST00000526025 DCAF6Q58WW2 860 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 PPP1R15BQ5SWA1 713 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 PLEKHA7Q6IQ23 1121 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 DNAJC24Q6P3W2 148 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 CCDC170Q8IYT3 715 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 OSCP1Q8WVF1 389 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 PGAP3Q96FM1 320 aaPredicted RBP21.65■■□□□ 1.06
CD44-222ENST00000526025 FAM83CQ9BQN1 747 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 DDX23Q9BUQ8 820 aaKnown RBP21.65■■□□□ 1.06
CD44-222ENST00000526025 GKN1Q9NS71 199 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 TLR6Q9Y2C9 796 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 ZNF510Q9Y2H8 683 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 SH3BP1Q9Y3L3 701 aa21.65■■□□□ 1.06
CD44-222ENST00000526025 SLC12A8A0AV02 714 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 TMCO5BA8MYB1 307 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 ARNTLO00327 626 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 ZNF263O14978 683 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 IRAK2O43187 625 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 GREM1O60565 184 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 GRAP2O75791 330 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 STC2O76061 302 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 LATS1O95835 1130 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 TRUB2O95900 331 aaKnown RBP21.64■■□□□ 1.05
CD44-222ENST00000526025 KRT3P12035 628 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 RRM1P23921 792 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 TAC4Q86UU9 113 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 TMTC1Q8IUR5 882 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 NPY6RQ99463 290 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 SELENOOQ9BVL4 669 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 METTL5Q9NRN9 209 aaKnown RBP21.64■■□□□ 1.05
CD44-222ENST00000526025 PARVAQ9NVD7 372 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 SFMBT1Q9UHJ3 866 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 SCINQ9Y6U3 715 aa21.64■■□□□ 1.05
CD44-222ENST00000526025 ANKRD62A6NC57 917 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 C2CD4BA6NLJ0 364 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 GDI1P31150 447 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 GBP1P32455 592 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 FLT3P36888 993 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 MLLT6P55198 1093 aaPredicted RBP21.63■■□□□ 1.05
CD44-222ENST00000526025 GFPT1Q06210 699 aaPredicted RBP21.63■■□□□ 1.05
CD44-222ENST00000526025 MTA1Q13330 715 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 GRM2Q14416 872 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 SLC25A52Q3SY17 297 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 CCDC122Q5T0U0 273 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 C10orf76Q5T2E6 689 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 NUGGCQ68CJ6 796 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 Q6ZNB5 142 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 SPC24Q8NBT2 197 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 AZIN2Q96A70 460 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 SLC39A13Q96H72 371 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 BRD9Q9H8M2 597 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 MUTYHQ9UIF7 546 aa21.63■■□□□ 1.05
CD44-222ENST00000526025 A0A0C4DFX4 3053 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 LCA5LO95447 670 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 F9P00740 461 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 PTPN9P43378 593 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 TBX4P57082 545 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 GPC5P78333 572 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 MAMLD1Q13495 774 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 GSE1Q14687 1217 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 BNIPLQ7Z465 357 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 UNC45BQ8IWX7 931 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 ST13P5Q8NFI4 369 aaPredicted RBP21.62■■□□□ 1.05
CD44-222ENST00000526025 ATP2A3Q93084 1043 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 ZNF653Q96CK0 615 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 FAM204AQ9H8W3 233 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 MRPL47Q9HD33 250 aaKnown RBP21.62■■□□□ 1.05
CD44-222ENST00000526025 DUS2Q9NX74 493 aaKnown RBP21.62■■□□□ 1.05
CD44-222ENST00000526025 CNOT8Q9UFF9 292 aaKnown RBP21.62■■□□□ 1.05
CD44-222ENST00000526025 STOML2Q9UJZ1 356 aa21.62■■□□□ 1.05
CD44-222ENST00000526025 MSI1O43347 362 aaKnown RBP21.61■■□□□ 1.05
CD44-222ENST00000526025 DCXO43602 365 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 SLC2A3P11169 496 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 ALADP13716 330 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 IFNAR2P48551 515 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 HARS2P49590 506 aaKnown RBP21.61■■□□□ 1.05
CD44-222ENST00000526025 RNASE9P60153 205 aaKnown RBP21.61■■□□□ 1.05
CD44-222ENST00000526025 EML3Q32P44 896 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 TRNP1Q6NT89 227 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 FNIP1Q8TF40 1166 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 ASIC4Q96FT7 647 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 FCRL2Q96LA5 508 aaPredicted RBP21.61■■□□□ 1.05
CD44-222ENST00000526025 IRX2Q9BZI1 471 aaPredicted RBP21.61■■□□□ 1.05
CD44-222ENST00000526025 WNT16Q9UBV4 365 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 INTUQ9ULD6 942 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 PAXBP1Q9Y5B6 917 aa21.61■■□□□ 1.05
CD44-222ENST00000526025 FAM170AA1A519 330 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 NARSO43776 548 aaKnown RBP21.6■■□□□ 1.05
CD44-222ENST00000526025 ENDOD1O94919 500 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 NFATC1O95644 943 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 CYP1A2P05177 515 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 IRF1P10914 325 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 GLULP15104 373 aa21.6■■□□□ 1.05
CD44-222ENST00000526025 CORO1AP31146 461 aaKnown RBP21.6■■□□□ 1.05
CD44-222ENST00000526025 SDC4P31431 198 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms