RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 USP40Q9NVE5 1235 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 ATAD3AQ9NVI7 634 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 FRRS1LQ9P0K9 344 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 ARHGAP20Q9P2F6 1191 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 SRRDQ9UH36 339 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 NAGPAQ9UK23 515 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 AJAP1Q9UKB5 411 aaPredicted RBP4.73□□□□□ -1.65
CD44-213ENST00000525209 AP4E1Q9UPM8 1137 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 PCDHA5Q9Y5H7 936 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TRPV2Q9Y5S1 764 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 SLC30A1Q9Y6M5 507 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 ABCC8Q09428 1581 aa4.73□□□□□ -1.65
CD44-213ENST00000525209 TTC21BQ7Z4L5 1316 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TOP2AP11388 1531 aaKnown RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM90A18PA6NE21 464 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM90A16PA6NEW6 464 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 WTIPA6NIX2 430 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM90A9PA6NNJ1 464 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM90A5PA8MXJ8 464 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SLC27A2O14975 620 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 POLR3GO15318 223 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 FOXP2O15409 715 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PSMD10O75832 226 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 EPN2O95208 641 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 MATN4O95460 622 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 INHBAP08476 426 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 RHOXF2BP0C7M4 288 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM90A15PP0C7V4 464 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SUPT20HL2P0C7V6 817 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM90A14PP0C7W9 464 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PRR35P0CG20 571 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SPATA31C1P0DKV0 1188 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 CKBP12277 381 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SELLP14151 372 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FDPSP14324 419 aaKnown RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 CPA1P15085 419 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PECAM1P16284 738 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 KLRC1P26715 233 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PRDX5P30044 214 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 GDI1P31150 447 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 GALK1P51570 392 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 RBM5P52756 815 aaKnown RBP eCLIP4.72□□□□□ -1.65
CD44-213ENST00000525209 ATXN3P54252 364 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 ARF5P84085 180 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 KRT17Q04695 432 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TLE1Q04724 770 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PPATQ06203 517 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SCN1BQ07699 218 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 NSUN2Q08J23 767 aaKnown RBP eCLIP4.72□□□□□ -1.65
CD44-213ENST00000525209 MGAT5Q09328 741 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 KIF5AQ12840 1032 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 NPRL3Q12980 569 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 ZBTB17Q13105 803 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TRIM28Q13263 835 aaKnown RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 LAPTM5Q13571 262 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 RAB32Q13637 225 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PTK6Q13882 451 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TUBB2AQ13885 445 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 RCN2Q14257 317 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TTLL4Q14679 1199 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 CLCA4Q14CN2 919 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PCLAFQ15004 111 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 MED22Q15528 200 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 HFEQ30201 348 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 ATXN7L2Q5T6C5 722 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 PM20D1Q6GTS8 502 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM117BQ6P1L5 589 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TMEM154Q6P9G4 183 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 ZCCHC12Q6PEW1 402 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 ZYG11AQ6WRX3 759 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FAM90A1Q86YD7 464 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SYCP3Q8IZU3 236 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 CNTROBQ8N137 903 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 FBXW8Q8N3Y1 598 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 AFAP1Q8N556 730 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 DCLK2Q8N568 766 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 OR56A3Q8NH54 315 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 CASP10Q92851 521 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 RAB24Q969Q5 203 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 ISL2Q96A47 359 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 NLRP4Q96MN2 994 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 CTAGE1Q96RT6 745 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 TUBGCP5Q96RT8 1024 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SH3GL2Q99962 352 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 LBHD1Q9BQE6 289 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 RHOXF2Q9BQY4 288 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SLC39A3Q9BRY0 314 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 NAA11Q9BSU3 229 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 TUBB2BQ9BVA1 445 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 UTP14AQ9BVJ6 771 aaKnown RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 C1orf43Q9BWL3 253 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 PCED1AQ9H1Q7 454 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 ABCG8Q9H221 673 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 ATXN3LQ9H3M9 355 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 HEYLQ9NQ87 328 aaPredicted RBP4.72□□□□□ -1.65
CD44-213ENST00000525209 TRPV5Q9NQA5 729 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.72□□□□□ -1.65
CD44-213ENST00000525209 PPP1R14DQ9NXH3 145 aa4.72□□□□□ -1.65
CD44-213ENST00000525209 SEPT10Q9P0V9 454 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms