RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 GABRB2P47870 512 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 GPR15P49685 360 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 VEGFBP49765 207 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 ARL4CP56559 192 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 SLC10A2Q12908 348 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-216ENST00000524481 FAM72AQ5TYM5 149 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 FAM72DQ6L9T8 149 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 TRMT10CQ7L0Y3 403 aaKnown RBP12.2□□□□□ -0.46
PTPRK-216ENST00000524481 EXOC3L1Q86VI1 746 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 FAM72BQ86X60 149 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 THEM5Q8N1Q8 247 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 PPM1NQ8N819 430 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 NIPA2Q8N8Q9 360 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 FNIP1Q8TF40 1166 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 ATXN7L3BQ96GX2 97 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 KCTD15Q96SI1 283 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-216ENST00000524481 ELAC2Q9BQ52 826 aaKnown RBP12.2□□□□□ -0.46
PTPRK-216ENST00000524481 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 WDCPQ9H6R7 721 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 PTCH2Q9Y6C5 1203 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 NUP205Q92621 2012 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 MDM4O15151 490 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 IL4RP24394 825 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 PCSK1P29120 753 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 STX2P32856 288 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 MATKP42679 507 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 LHX1P48742 406 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 TSPY1Q01534 308 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 SLC35B2Q8TB61 432 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 PGBD4Q96DM1 585 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 SEPT5Q99719 369 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-216ENST00000524481 ETNK1Q9HBU6 452 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 GDAP2Q9NXN4 497 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 EEF2KO00418 725 aaKnown RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 TRIM66O15016 1216 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 B4GALT3O60512 393 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 PCK1P35558 622 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 UPP1Q16831 310 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 EFHC2Q5JST6 749 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 HIBCHQ6NVY1 386 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 KDM7AQ6ZMT4 941 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 TAOK1Q7L7X3 1001 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 NLRP14Q86W24 1093 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 OR10T2Q8NGX3 314 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 FBF1Q8TES7 1133 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 CSPG4P5Q96PW8 444 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 TKTL2Q9H0I9 626 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 DFFAO00273 331 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 XPO1O14980 1071 aaKnown RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 ITGAVP06756 1048 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 SAT1P21673 171 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 CA4P22748 312 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 L1CAMP32004 1257 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 GBP2P32456 591 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 ACADSBP45954 432 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 MGAT5BQ3V5L5 792 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 NUGGCQ68CJ6 796 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 SYDE1Q6ZW31 735 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 RTN4RL1Q86UN2 441 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 PPIL6Q8IXY8 311 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 TOP6BLQ8N6T0 577 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 PQLC3Q8N755 202 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 CABS1Q96KC9 395 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 HNRNPABQ99729 332 aaKnown RBP12.19□□□□□ -0.46
PTPRK-216ENST00000524481 PCDH9Q9HC56 1237 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 GIT1Q9Y2X7 761 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 CDH23Q9H251 3354 aa12.19□□□□□ -0.46
PTPRK-216ENST00000524481 A0A1W2PPM1 405 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 A0A1W2PQ45 241 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 A0A1W2PQY0 241 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 GMNCA6NCL1 334 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 FAM155BO75949 473 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 LTFP02788 710 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 RPL17P18621 184 aaKnown RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 LIG3P49916 1009 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 TPI1P60174 286 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 PCBP1Q15365 356 aaKnown RBP eCLIP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 PKDCCQ504Y2 493 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 BTBD8Q5XKL5 378 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 SLC26A9Q7LBE3 791 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 POPDC2Q9HBU9 364 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 NKIRAS1Q9NYS0 192 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 KLHL8Q9P2G9 620 aaPredicted RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 H0YHG0 523 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 KIAA0754O94854 1291 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 TBX18O95935 607 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 IVLP07476 585 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 CAV1Q03135 178 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 TUSC3Q13454 348 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 QPCTQ16769 361 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 ARHGAP17Q68EM7 881 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 IGDCC3Q8IVU1 814 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 TTC9BQ8N6N2 239 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 EIF1ADQ8N9N8 165 aaKnown RBP12.18□□□□□ -0.46
PTPRK-216ENST00000524481 DNAAF3Q8N9W5 541 aa12.18□□□□□ -0.46
PTPRK-216ENST00000524481 HSFY1Q96LI6 401 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms