RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006		M0QYT0	321 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	CLDN5	O00501	218 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	PPP1R12A	O14974	1030 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	CHAD	O15335	359 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	TRAPPC3	O43617	180 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	CP	P00450	1065 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	POMC	P01189	267 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	IGHA2	P01877	340 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	VIM	P08670	466 aa	Known RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	BRAF	P15056	766 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	STX2	P32856	288 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	MMP13	P45452	471 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	AIF1	P55008	147 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	HDAC4	P56524	1084 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	YWHAG	P61981	247 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	NKX3-2	P78367	333 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	IFI35	P80217	286 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	MRPS5	P82675	430 aa	Known RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	PPARD	Q03181	441 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	NME3	Q13232	169 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	XRCC4	Q13426	336 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	TUSC3	Q13454	348 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	DPYSL2	Q16555	572 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	MAP3K21	Q5TCX8	1036 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	ANKMY2	Q8IV38	441 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	UNC45B	Q8IWX7	931 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	SRRM1	Q8IYB3	904 aa	Known RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	FUK	Q8N0W3	1084 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	ANKLE1	Q8NAG6	615 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	GLIS1	Q8NBF1	620 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	SLC7A14	Q8TBB6	771 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	CHMP6	Q96FZ7	201 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	PWWP2A	Q96N64	755 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	FAM193B	Q96PV7	902 aa	Predicted RBP	11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	SMC6	Q96SB8	1091 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	ADAM2	Q99965	735 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	GDF15	Q99988	308 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	ADAM7	Q9H2U9	754 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	POPDC2	Q9HBU9	364 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	CNGB3	Q9NQW8	809 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	RAB6B	Q9NRW1	208 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	SLC24A2	Q9UI40	661 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	NME7	Q9Y5B8	376 aa		11.17	□□□□□ -0.62
SPIDR-222	ENST00000524006	ATXN2	Q99700	1313 aa	Known RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	ALPK3	Q96L96	1907 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	TMEM120B	A0PK00	339 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	BCLAF3	A2AJT9	711 aa	Known RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	DCDC2C	A8MYV0	355 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	HACD1	B0YJ81	288 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	RASA4B	C9J798	803 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	KBTBD13	C9JR72	458 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	EEF2K	O00418	725 aa	Known RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	RASA4	O43374	803 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	ATP2C2	O75185	946 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	B3GAT3	O94766	335 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	ENDOD1	O94919	500 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	IFNAR2	P48551	515 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	GDF10	P55107	478 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	GEMIN4	P57678	1058 aa	Known RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	TPI1	P60174	286 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	LPIN1	Q14693	890 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	SLC45A4	Q5BKX6	768 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	RNF187	Q5TA31	235 aa	Predicted RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	SLC9A4	Q6AI14	798 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	OVOS1	Q6IE37	1185 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	C4orf50	Q6ZRC1	276 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	CLEC20A	Q6ZU45	233 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	LIMS2	Q7Z4I7	341 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	MRPL10	Q7Z7H8	261 aa	Known RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	TADA2B	Q86TJ2	420 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	FAM131B	Q86XD5	332 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	C7orf61	Q8IZ16	206 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	PLD5	Q8N7P1	536 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	TFB1M	Q8WVM0	346 aa	Known RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	CPT1B	Q92523	772 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	WNT8B	Q93098	351 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	RNF34	Q969K3	372 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	MYLPF	Q96A32	169 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	7e-9	■■■■■ 36.4
SPIDR-222	ENST00000524006	CCT8L2	Q96SF2	557 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	KCTD15	Q96SI1	283 aa	Predicted RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	ULBP1	Q9BZM6	244 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	C10orf88	Q9H8K7	445 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	HMX1	Q9NP08	348 aa	Predicted RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	OGDHL	Q9ULD0	1010 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	ACTL7B	Q9Y614	415 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	SQOR	Q9Y6N5	450 aa		11.16	□□□□□ -0.62
SPIDR-222	ENST00000524006	CLUH	O75153	1309 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	MOXD2P	A6NHM9	499 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	GABRD	O14764	452 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	ALOX15B	O15296	676 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	CREB3	O43889	395 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	ZNF623	O75123	536 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	LTF	P02788	710 aa		11.15	□□□□□ -0.62
SPIDR-222	ENST00000524006	L1CAM	P32004	1257 aa		11.15	□□□□□ -0.62

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