RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 TCEAL1Q15170 157 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 SNX30Q5VWJ9 437 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 BTBD8Q5XKL5 378 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 DCUN1D2Q6PH85 259 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 YAF2Q8IY57 180 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 DEFB106AQ8N104 65 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.41
PVT1-215ENST00000522963 RXFP2Q8WXD0 754 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 EDEM1Q92611 657 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 GOLGA1Q92805 767 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 PBXIP1Q96AQ6 731 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 ELSPBP1Q96BH3 223 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 TRIM44Q96DX7 344 aaPredicted RBP12.46□□□□□ -0.41
PVT1-215ENST00000522963 SLC46A2Q9BY10 475 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 MFSD1Q9H3U5 465 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 MRPL47Q9HD33 250 aaKnown RBP12.46□□□□□ -0.41
PVT1-215ENST00000522963 OSGEPQ9NPF4 335 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 C11orf16Q9NQ32 467 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 ABCC13Q9NSE7 274 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.46□□□□□ -0.41
PVT1-215ENST00000522963 CLIC5Q9NZA1 410 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 UVRAGQ9P2Y5 699 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 SALL4Q9UJQ4 1053 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 NUDT5Q9UKK9 219 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 NAALADL1Q9UQQ1 740 aa12.46□□□□□ -0.41
PVT1-215ENST00000522963 MYO16Q9Y6X6 1858 aa12.46□□□□□ -0.42
PVT1-215ENST00000522963 PATJQ8NI35 1801 aa12.46□□□□□ -0.42
PVT1-215ENST00000522963 NUP210Q8TEM1 1887 aaPredicted RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 A0A0A6YYK5 440 aaPredicted RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 C2orf78A6NCI8 922 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 C2CD4BA6NLJ0 364 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 GPR37L1O60883 481 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 MTA2O94776 668 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 PRAMEF12O95522 483 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 PDGFBP01127 241 aaPredicted RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 RALAP11233 206 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 NCAM1P13591 858 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 FCARP24071 287 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 GDI1P31150 447 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 PSEN1P49768 467 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 PITX1P78337 314 aaPredicted RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 OGDHQ02218 1023 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 KIF5AQ12840 1032 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 DCAF6Q58WW2 860 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 SYPL2Q5VXT5 272 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 VITQ6UXI7 678 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 ZNF662Q6ZS27 426 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 BEND5Q7L4P6 421 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 ARCQ7LC44 396 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 REXO1L1PQ8IX06 675 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 RHOT2Q8IXI1 618 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 CMTM8Q8IZV2 173 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 SIX5Q8N196 739 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 TXLNBQ8N3L3 684 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 ARL14EPQ8N8R7 260 aaPredicted RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 BTBD6Q96KE9 485 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 CYP2S1Q96SQ9 504 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 LRFN3Q9BTN0 628 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 DDX23Q9BUQ8 820 aaKnown RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 CCSER2Q9H7U1 834 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 BRD9Q9H8M2 597 aa12.45□□□□□ -0.42
PVT1-215ENST00000522963 TRMT1Q9NXH9 659 aaKnown RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.45□□□□□ -0.42
PVT1-215ENST00000522963 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
PVT1-215ENST00000522963 TRAV19A0A0A6YYK7 116 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 CAPN9O14815 690 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 MDM4O15151 490 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 TLR5O60602 858 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 TBX18O95935 607 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 OAS1P00973 400 aaKnown RBP12.44□□□□□ -0.42
PVT1-215ENST00000522963 CKMP06732 381 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 PDGFRAP16234 1089 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 PSMC3P17980 439 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 TFE3P19532 575 aaPredicted RBP12.44□□□□□ -0.42
PVT1-215ENST00000522963 GPD1P21695 349 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 DDX6P26196 483 aaKnown RBP eCLIP12.44□□□□□ -0.42
PVT1-215ENST00000522963 NOS2P35228 1153 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 MATKP42679 507 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 NOP2P46087 812 aaKnown RBP12.44□□□□□ -0.42
PVT1-215ENST00000522963 ZNF252P-AS1Q0IIN9 211 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 CCDC14Q49A88 953 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 HECTD3Q5T447 861 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 OTUD1Q5VV17 481 aaPredicted RBP12.44□□□□□ -0.42
PVT1-215ENST00000522963 MSANTD2Q6P1R3 559 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 ZNF276Q8N554 614 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 FLCNQ8NFG4 579 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 DQX1Q8TE96 717 aaKnown RBP12.44□□□□□ -0.42
PVT1-215ENST00000522963 RNF139Q8WU17 664 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 RSPRY1Q96DX4 576 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 ASIC4Q96FT7 647 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 CFAP57Q96MR6 1250 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 TRIM62Q9BVG3 475 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 ADAM33Q9BZ11 813 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 TSGA10Q9BZW7 698 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 ANAPC7Q9UJX3 599 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 PAXBP1Q9Y5B6 917 aa12.44□□□□□ -0.42
PVT1-215ENST00000522963 ZDBF2Q9HCK1 2354 aa12.43□□□□□ -0.42
PVT1-215ENST00000522963 MACROD2A1Z1Q3 448 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms