RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 IGLV3-25P01717 112 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 PSMA2P25787 234 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 SLC7A9P82251 487 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 ATP11AP98196 1134 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 SH3PXD2AQ5TCZ1 1133 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 TRIM44Q96DX7 344 aaPredicted RBP25.19■■□□□ 1.62
PVT1-212ENST00000521951 TSGA10Q9BZW7 698 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 GDE1Q9NZC3 331 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 CALCOCO1Q9P1Z2 691 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 IP6K2Q9UHH9 426 aa25.19■■□□□ 1.62
PVT1-212ENST00000521951 SPTBN5Q9NRC6 3674 aaKnown RBP25.19■■□□□ 1.62
PVT1-212ENST00000521951 ZSCAN12O43309 604 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 MSI1O43347 362 aaKnown RBP25.18■■□□□ 1.62
PVT1-212ENST00000521951 BUB1O43683 1085 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 KRT86O43790 486 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 AVPR1AP37288 418 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 TFF2Q03403 129 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 CDO1Q16878 200 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 BNIPLQ7Z465 357 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 REXO1L1PQ8IX06 675 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 CENPIQ92674 756 aaPredicted RBP25.18■■□□□ 1.62
PVT1-212ENST00000521951 PGAP3Q96FM1 320 aaPredicted RBP25.18■■□□□ 1.62
PVT1-212ENST00000521951 KLF16Q9BXK1 252 aaPredicted RBP25.18■■□□□ 1.62
PVT1-212ENST00000521951 FAM204AQ9H8W3 233 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 LZTFL1Q9NQ48 299 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 DDIT4Q9NX09 232 aa25.18■■□□□ 1.62
PVT1-212ENST00000521951 SYNJ2BP-COX16A0A087WUM0 186 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 SLC12A8A0AV02 714 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 ENDOD1O94919 500 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 GBP1P32455 592 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 GBP2P32456 591 aaPredicted RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 EIF4EBP2Q13542 120 aaPredicted RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 RAB6CQ53S08 254 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 ARID3BQ8IVW6 561 aaPredicted RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 ZSCAN18Q8TBC5 510 aaPredicted RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 FAM172AQ8WUF8 416 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 ZFRQ96KR1 1074 aaKnown RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 SERPINB11Q96P15 392 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 RAB6CQ9H0N0 254 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 SMG9Q9H0W8 520 aaKnown RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 GKN1Q9NS71 199 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 SMPD4Q9NXE4 827 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 TRMT1Q9NXH9 659 aaKnown RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 COX16Q9P0S2 106 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 GUCA1BQ9UMX6 200 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 PAXBP1Q9Y5B6 917 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 CPQQ9Y646 472 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 HELZP42694 1942 aaKnown RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 NUP210Q8TEM1 1887 aaPredicted RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 MACROD2A1Z1Q3 448 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 IRAK2O43187 625 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 WEE1P30291 646 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 NAP1L1P55209 391 aaKnown RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 ZXDBP98169 803 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 NME3Q13232 169 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 PIGHQ14442 188 aaPredicted RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 MESDQ14696 234 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 PTCRAQ6ISU1 281 aaPredicted RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 STRADAQ7RTN6 431 aa25.17■■□□□ 1.62
PVT1-212ENST00000521951 HBS1LQ9Y450 684 aaKnown RBP25.17■■□□□ 1.62
PVT1-212ENST00000521951 PRUNE2Q8WUY3 3088 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 PROSCO94903 275 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 F9P00740 461 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 ATXN1P54253 815 aaKnown RBP25.16■■□□□ 1.62
PVT1-212ENST00000521951 COG7P83436 770 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 DEUP1Q05D60 604 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 NNTQ13423 1086 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 TRIP4Q15650 581 aaPredicted RBP25.16■■□□□ 1.62
PVT1-212ENST00000521951 SMAD2Q15796 467 aaKnown RBP25.16■■□□□ 1.62
PVT1-212ENST00000521951 ARHGAP29Q52LW3 1261 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 FAM78AQ5JUQ0 283 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 TPCN2Q8NHX9 752 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 USP13Q92995 863 aaPredicted RBP25.16■■□□□ 1.62
PVT1-212ENST00000521951 ASB16Q96NS5 453 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 PIGVQ9NUD9 493 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 TDP1Q9NUW8 608 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 LCMT1Q9UIC8 334 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 ARHGAP26Q9UNA1 814 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 CCL26Q9Y258 94 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 TLR6Q9Y2C9 796 aa25.16■■□□□ 1.62
PVT1-212ENST00000521951 ZFP37Q9Y6Q3 630 aaPredicted RBP25.16■■□□□ 1.62
PVT1-212ENST00000521951 XIRP2A4UGR9 3374 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 TMEM110-MUSTN1A8MSY1 372 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 BUB1BO60566 1050 aaPredicted RBP25.15■■□□□ 1.62
PVT1-212ENST00000521951 MOCS3O95396 460 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 PRAMEF12O95522 483 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 HMBSP08397 361 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 LAMP2P13473 410 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 DESP17661 470 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 TBX4P57082 545 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 ACAP1Q15027 740 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 PUS10Q3MIT2 529 aaKnown RBP25.15■■□□□ 1.62
PVT1-212ENST00000521951 OTOP3Q7RTS5 596 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 CCAR2Q8N163 923 aaKnown RBP25.15■■□□□ 1.62
PVT1-212ENST00000521951 RNF10Q8N5U6 811 aaKnown RBP25.15■■□□□ 1.62
PVT1-212ENST00000521951 ARFGAP1Q8N6T3 406 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 NIPA2Q8N8Q9 360 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 ADAMTS19Q8TE59 1207 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 SMARCD2Q92925 531 aa25.15■■□□□ 1.62
PVT1-212ENST00000521951 SLC39A13Q96H72 371 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms