RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 HNRNPLP14866 589 aaKnown RBP eCLIP17.85■□□□□ 0.458e-7■□□□□ 10.1
SQLE-205ENST00000521232 CORO1AP31146 461 aaKnown RBP17.85■□□□□ 0.45
SQLE-205ENST00000521232 DAOAP59103 153 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 TRIP4Q15650 581 aaPredicted RBP17.85■□□□□ 0.45
SQLE-205ENST00000521232 EOGTQ5NDL2 527 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 GRAMD4Q6IC98 578 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 ENOSF1Q7L5Y1 443 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 KBTBD6Q86V97 674 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 CREBRFQ8IUR6 639 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 ABCA7Q8IZY2 2146 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 IRGQQ8WZA9 623 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 P2RY11Q96G91 374 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 FAM81BQ96LP2 452 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 DNAJC17Q9NVM6 304 aaKnown RBP17.85■□□□□ 0.45
SQLE-205ENST00000521232 DLL3Q9NYJ7 618 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 AGO1Q9UL18 857 aaKnown RBP17.85■□□□□ 0.45
SQLE-205ENST00000521232 HCN2Q9UL51 889 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 USP18Q9UMW8 372 aa17.85■□□□□ 0.45
SQLE-205ENST00000521232 GTPBP10A4D1E9 387 aaKnown RBP17.84■□□□□ 0.45
SQLE-205ENST00000521232 PRR5-ARHGAP8B1AHC4 643 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 M0QYV0 167 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 PENKP01210 267 aaPredicted RBP17.84■□□□□ 0.45
SQLE-205ENST00000521232 SLC9A1P19634 815 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 GPD2P43304 727 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 RPL34P49207 117 aaKnown RBP17.84■□□□□ 0.45
SQLE-205ENST00000521232 RGS7P49802 495 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 ARHGAP8P85298 464 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 LMNB2Q03252 620 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 CSRP2Q16527 193 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 C10orf76Q5T2E6 689 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 TRIM65Q6PJ69 517 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 GBP6Q6ZN66 633 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 TRMT11Q7Z4G4 463 aaKnown RBP17.84■□□□□ 0.45
SQLE-205ENST00000521232 DENND1CQ8IV53 801 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 FMNL3Q8IVF7 1028 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 RNF139Q8WU17 664 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 PLD4Q96BZ4 506 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 CRACR2AQ9BSW2 395 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 THAP9Q9H5L6 903 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 SEMA4GQ9NTN9 838 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 LMBRD1Q9NUN5 540 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 HBS1LQ9Y450 684 aaKnown RBP17.84■□□□□ 0.45
SQLE-205ENST00000521232 LAMA1P25391 3075 aa17.84■□□□□ 0.45
SQLE-205ENST00000521232 ALDH1A2O94788 518 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 KRT5P13647 590 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 ERCC5P28715 1186 aaPredicted RBP17.83■□□□□ 0.44
SQLE-205ENST00000521232 DGKGP49619 791 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 MFAP3P55082 362 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 PUM1Q14671 1186 aaKnown RBP eCLIP17.83■□□□□ 0.44
SQLE-205ENST00000521232 MEA1Q16626 185 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 PLK5Q496M5 336 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 USP39Q53GS9 565 aaKnown RBP17.83■□□□□ 0.44
SQLE-205ENST00000521232 FYB2Q5VWT5 728 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 SMYD5Q6GMV2 418 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 ANO7Q6IWH7 933 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 FAM217AQ8IXS0 508 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 CPXM2Q8N436 756 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 ZNF513Q8N8E2 541 aaPredicted RBP17.83■□□□□ 0.44
SQLE-205ENST00000521232 MDGA1Q8NFP4 955 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 EDEM1Q92611 657 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 NUP62CLQ9H1M0 184 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 DUSP15Q9H1R2 295 aaPredicted RBP17.83■□□□□ 0.44
SQLE-205ENST00000521232 POLMQ9NP87 494 aaPredicted RBP17.83■□□□□ 0.44
SQLE-205ENST00000521232 ZDHHC4Q9NPG8 344 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 PLK2Q9NYY3 685 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 SFMBT1Q9UHJ3 866 aa17.83■□□□□ 0.44
SQLE-205ENST00000521232 PRRT4C9JH25 899 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 DCLK1O15075 740 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 FBXO21O94952 628 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 EPN2O95208 641 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 SDHBP21912 280 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 MTIF2P46199 727 aaKnown RBP17.82■□□□□ 0.44
SQLE-205ENST00000521232 TPD52L1Q16890 204 aaPredicted RBP17.82■□□□□ 0.44
SQLE-205ENST00000521232 EXOC3L4Q17RC7 722 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 RSPO4Q2I0M5 234 aaPredicted RBP17.82■□□□□ 0.44
SQLE-205ENST00000521232 DPCR1Q3MIW9 517 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 GJB7Q6PEY0 223 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 TOGARAM2Q6ZUX3 1019 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 ERMP1Q7Z2K6 904 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 OLIG1Q8TAK6 271 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 STK32AQ8WU08 396 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 ZNF606Q8WXB4 792 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 BHMTQ93088 406 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 TPSD1Q9BZJ3 242 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 APEX2Q9UBZ4 518 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 DACH1Q9UI36 760 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 STOML2Q9UJZ1 356 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 SLC27A6Q9Y2P4 619 aa17.82■□□□□ 0.44
SQLE-205ENST00000521232 PIK3R2O00459 728 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 MED7O43513 233 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 FOXD2O60548 495 aaPredicted RBP17.81■□□□□ 0.44
SQLE-205ENST00000521232 RHOBTB1O94844 696 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 PON1P27169 355 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 NTSR1P30989 418 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 HARS2P49590 506 aaKnown RBP17.81■□□□□ 0.44
SQLE-205ENST00000521232 CT47A1Q5JQC4 288 aaPredicted RBP17.81■□□□□ 0.44
SQLE-205ENST00000521232 MSANTD2Q6P1R3 559 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 C11orf74Q86VG3 221 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 FAM114A1Q8IWE2 563 aa17.81■□□□□ 0.44
SQLE-205ENST00000521232 ARRDC1-AS1Q9H2J1 176 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms