RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 TRIM67Q6ZTA4 783 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 TOGARAM2Q6ZUX3 1019 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 HTR3DQ70Z44 454 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 TADA2BQ86TJ2 420 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 ZDHHC17Q8IUH5 632 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 UBALD2Q8IYN6 164 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 SIX5Q8N196 739 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 IRF7Q92985 503 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 CHFRQ96EP1 664 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 CDK5RAP1Q96SZ6 601 aaKnown RBP12.92□□□□□ -0.34
CLK4-208ENST00000520957 COX16Q9P0S2 106 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 AGO1Q9UL18 857 aaKnown RBP12.92□□□□□ -0.34
CLK4-208ENST00000520957 SH3BP1Q9Y3L3 701 aa12.92□□□□□ -0.34
CLK4-208ENST00000520957 TCRBV5S1A1TA0A578 114 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 E2F8A0AVK6 867 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 FAM86C2PA6NEL3 165 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 TRUB2O95900 331 aaKnown RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 GLI1P08151 1106 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 TPM1P09493 284 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 ALADP13716 330 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 KCNA4P22459 653 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 CORO1AP31146 461 aaKnown RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 RFC1P35251 1148 aaPredicted RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 ATXN1P54253 815 aaKnown RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 RPL7AP62424 266 aaKnown RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 C1QBPQ07021 282 aaKnown RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 EIF4EBP2Q13542 120 aaPredicted RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 TRIP4Q15650 581 aaPredicted RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 OTUD1Q5VV17 481 aaPredicted RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 RHBDF2Q6PJF5 856 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 Q6ZNB5 142 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 BEND5Q7L4P6 421 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 DENND1CQ8IV53 801 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 DRC7Q8IY82 874 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 C11orf16Q9NQ32 467 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 METTL5Q9NRN9 209 aaKnown RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 OLA1Q9NTK5 396 aaKnown RBP12.91□□□□□ -0.34
CLK4-208ENST00000520957 ASNSD1Q9NWL6 643 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 FBXL21Q9UKT6 434 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 STRIP2Q9ULQ0 834 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 COL4A3Q01955 1670 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 OBSL1O75147 1896 aa12.91□□□□□ -0.34
CLK4-208ENST00000520957 GOLGA6L7A0A1B0GV03 622 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 TRDMT1O14717 391 aaKnown RBP12.9□□□□□ -0.34
CLK4-208ENST00000520957 RTN2O75298 545 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 IGLV3-25P01717 112 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 GZMAP12544 262 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 MATKP42679 507 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
CLK4-208ENST00000520957 NME3Q13232 169 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 RUNX3Q13761 415 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
CLK4-208ENST00000520957 TXNDC11Q6PKC3 985 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 TMEM25Q86YD3 366 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 CNGA4Q8IV77 575 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 MSANTD4Q8NCY6 345 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 FCRL2Q96LA5 508 aaPredicted RBP12.9□□□□□ -0.34
CLK4-208ENST00000520957 CFAP57Q96MR6 1250 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 ISCUQ9H1K1 167 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 ECT2Q9H8V3 914 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
CLK4-208ENST00000520957 FBRSL1Q9HCM7 1045 aaKnown RBP12.9□□□□□ -0.34
CLK4-208ENST00000520957 SPTLC3Q9NUV7 552 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLK4-208ENST00000520957 WNT16Q9UBV4 365 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
CLK4-208ENST00000520957 DENND4CQ5VZ89 1909 aa12.9□□□□□ -0.34
CLK4-208ENST00000520957 TECTAO75443 2155 aa12.9□□□□□ -0.35
CLK4-208ENST00000520957 DAB1O75553 588 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 IGLV3-27P01718 113 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 CALB1P05937 261 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 KRT3P12035 628 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 ABCB4P21439 1286 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 NOS2P35228 1153 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 IFNAR2P48551 515 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 TBX4P57082 545 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 CDK17Q00537 523 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 SIGLEC14Q08ET2 396 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 MAMLD1Q13495 774 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 DHCR24Q15392 516 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
CLK4-208ENST00000520957 LY6G5CQ5SRR4 150 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 CCDC122Q5T0U0 273 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 ALKBH5Q6P6C2 394 aaKnown RBP12.89□□□□□ -0.35
CLK4-208ENST00000520957 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLK4-208ENST00000520957 RXFP2Q8WXD0 754 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 BHMTQ93088 406 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 NT5C3BQ969T7 300 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 SLC39A13Q96H72 371 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 TBCBQ99426 244 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 NPY6RQ99463 290 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 DDX23Q9BUQ8 820 aaKnown RBP12.89□□□□□ -0.35
CLK4-208ENST00000520957 PACSIN1Q9BY11 444 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 TRIM7Q9C029 511 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 GRPEL1Q9HAV7 217 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 ANLNQ9NQW6 1124 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 PIGVQ9NUD9 493 aa12.89□□□□□ -0.35
CLK4-208ENST00000520957 ZNHIT6Q9NWK9 470 aaKnown RBP12.89□□□□□ -0.35
CLK4-208ENST00000520957 DDIT4Q9NX09 232 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms