RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 HFE2Q6ZVN8 426 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 BZW1Q7L1Q6 419 aaKnown RBP11.76□□□□□ -0.53
CLK4-206ENST00000520878 FUKQ8N0W3 1084 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 THEM5Q8N1Q8 247 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 RNF139Q8WU17 664 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 SGSM3Q96HU1 749 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 DUSP16Q9BY84 665 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 NPHS2Q9NP85 383 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 CFAP69A5D8W1 941 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
CLK4-206ENST00000520878 PYGBP11216 843 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
CLK4-206ENST00000520878 ADRA1DP25100 572 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 PRKCZQ05513 592 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 DRICH1Q6PGQ1 229 aaPredicted RBP11.76□□□□□ -0.53
CLK4-206ENST00000520878 LRRC6Q86X45 466 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 COLGALT1Q8NBJ5 622 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 RAET1EQ8TD07 263 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 HSFY1Q96LI6 401 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 PGLYRP2Q96PD5 576 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 CSPG4P5Q96PW8 444 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 ABCF3Q9NUQ8 709 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 CNTN3Q9P232 1028 aa11.76□□□□□ -0.53
CLK4-206ENST00000520878 DUSP11O75319 330 aaKnown RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 MATKP42679 507 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 KCNA10Q16322 511 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 BTBD8Q5XKL5 378 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 SMG8Q8ND04 991 aaKnown RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 TCP10LQ8TDR4 215 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 ATXN2LQ8WWM7 1075 aaKnown RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 TBC1D31Q96DN5 1066 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 KCTD15Q96SI1 283 aaPredicted RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 TMEM109Q9BVC6 243 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 FRMD8P1Q9BZ68 369 aaPredicted RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 TRMT13Q9NUP7 481 aaKnown RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 PCMTD2Q9NV79 361 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 EFR3BQ9Y2G0 817 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 SNX10Q9Y5X0 201 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 DOCK3Q8IZD9 2030 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 TRPA1O75762 1119 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 CSPG5O95196 566 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 TGM2P21980 687 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 GRIA1P42261 906 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 MRPS5P82675 430 aaKnown RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 SDHAF4Q5VUM1 108 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 TRABD2AQ86V40 505 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 ZDHHC17Q8IUH5 632 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 SPATA2LQ8IUW3 424 aaPredicted RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 KBTBD7Q8WVZ9 684 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 HTR3CQ8WXA8 447 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 ARL5CA6NH57 179 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 YJEFN3A6XGL0 299 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 E7ENQ6 273 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 PIRO00625 290 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 OR4Q2P0C623 313 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 GABRB2P47870 512 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 MORN1Q5T089 497 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 SLC26A9Q7LBE3 791 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 RIBC1Q8N443 379 aaPredicted RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 STKLD1Q8NE28 680 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 CDKL2Q92772 493 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 PCED1BQ96HM7 432 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 RILPQ96NA2 401 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 AGO3Q9H9G7 860 aaKnown RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 MIOSQ9NXC5 875 aa11.75□□□□□ -0.53
CLK4-206ENST00000520878 MARCOQ9UEW3 520 aaPredicted RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 SMG5Q9UPR3 1016 aaKnown RBP11.75□□□□□ -0.53
CLK4-206ENST00000520878 MYO18AQ92614 2054 aaKnown RBP11.74□□□□□ -0.53
CLK4-206ENST00000520878 TCRBV9S1A1TA0A576 114 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 TP73O15350 636 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 UBOX5O94941 541 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 HMBSP08397 361 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 NOS2P35228 1153 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 LHX1P48742 406 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 ANKRD20A3Q5VUR7 823 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 IGDCC3Q8IVU1 814 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 GLT1D1Q96MS3 346 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 NACA2Q9H009 215 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 POPDC2Q9HBU9 364 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 IL1RAPL1Q9NZN1 696 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 SENP1Q9P0U3 644 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 PHTF1Q9UMS5 762 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 RLFQ13129 1914 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 C3orf70A6NLC5 250 aaPredicted RBP11.74□□□□□ -0.53
CLK4-206ENST00000520878 RNF103O00237 685 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 KRT38O76015 456 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 GPX6P59796 221 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 TMPRSS15P98073 1019 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 E2F5Q15329 346 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 SLC1A5Q15758 541 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 OVOS1Q6IE37 1185 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 SAPCD2Q86UD0 394 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 PQLC3Q8N755 202 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 NAT8LQ8N9F0 302 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 CKAP2Q8WWK9 683 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 MAML1Q92585 1016 aa11.74□□□□□ -0.53
CLK4-206ENST00000520878 CENPTQ96BT3 561 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms