RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 FDFT1P37268 417 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 ABCG1P45844 678 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 HSD17B4P51659 736 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 MRPS5P82675 430 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 ACBD5Q5T8D3 534 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 PPWD1Q96BP3 646 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 TMA16Q96EY4 203 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 ANKRD36BP1Q96IX9 119 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 CPXM1Q96SM3 734 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 COX16Q9P0S2 106 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 E7ESA3 106 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 RALBP11234 206 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 TSNARE1Q96NA8 513 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 PPP1R16BQ96T49 567 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 DDX43Q9NXZ2 648 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 TTLL3Q9Y4R7 772 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 MMP10P09238 476 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 PABPC4LP0CB38 370 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 SERPINB9P50453 376 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 ADARP55265 1226 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 HDAC4P56524 1084 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 TAS1R3Q7RTX0 852 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 NETO2Q8NC67 525 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCNYQ8ND76 341 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 RXFP2Q8WXD0 754 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 DCUN1D1Q96GG9 259 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 CDRT15Q96T59 188 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCDC28BQ9BUN5 200 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 CEP41Q9BYV8 373 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 FRMD8P1Q9BZ68 369 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 ZNF518BQ9C0D4 1074 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 DHX35Q9H5Z1 703 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 NRDE2Q9H7Z3 1164 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 PXMP2Q9NR77 195 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 DNAAF2Q9NVR5 837 aaKnown RBP13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 ADA2Q9NZK5 511 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 CNTNAP2Q9UHC6 1331 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 TPP1O14773 563 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 KLF11O14901 512 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 MX2P20592 715 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 EIF4BP23588 611 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 GMPRP36959 345 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 NIPA1Q7RTP0 329 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 TNS4Q8IZW8 715 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 EME1Q96AY2 570 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 SCYL1Q96KG9 808 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 FAM210AQ96ND0 272 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 CAAP1Q9H8G2 361 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 USP21Q9UK80 565 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 NR2E3Q9Y5X4 410 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 WDR27A2RRH5 827 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 RFPL1O75677 317 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 ASS1P00966 412 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 TPP2P29144 1249 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 MAP3K10Q02779 954 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCNIQ14094 377 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 C15orf39Q6ZRI6 1047 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 KIAA0319LQ8IZA0 1049 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 RTKN2Q8IZC4 609 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 MPP5Q8N3R9 675 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 PHTF2Q8N3S3 785 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 NLRP7Q8WX94 980 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCT7Q99832 543 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 NTPCRQ9BSD7 190 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 TMEM165Q9HC07 324 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 CHADO15335 359 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 ASLP04424 464 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 SERPINE1P05121 402 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 GRIA1P42261 906 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 GRIA2P42262 883 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 SLC25A11Q02978 314 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 NRF1Q16656 503 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 NADK2Q4G0N4 442 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 ZC3H12AQ5D1E8 599 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 FAM47CQ5HY64 1035 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 PPM1JQ5JR12 505 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 KYAT3Q6YP21 454 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 FRMD7Q6ZUT3 714 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 EEPD1Q7L9B9 569 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 PTAR1Q7Z6K3 402 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 SNX32Q86XE0 403 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 NLRP4Q96MN2 994 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 SIRPGQ9P1W8 387 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 CNTN3Q9P232 1028 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 DNAJB4Q9UDY4 337 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCDC78A2IDD5 438 aa13.22□□□□□ -0.29
TRAPPC9-208ENST00000520857 GLRA3O75311 464 aa13.22□□□□□ -0.29
TRAPPC9-208ENST00000520857 TSHRP16473 764 aa13.22□□□□□ -0.29
TRAPPC9-208ENST00000520857 PPIDQ08752 370 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-208ENST00000520857 C6orf52Q5T4I8 152 aa13.22□□□□□ -0.29
TRAPPC9-208ENST00000520857 HEATR6Q6AI08 1181 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-208ENST00000520857 KLC3Q6P597 504 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms