RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TCRBV7S3A2A0A539 114 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 RNF103O00237 685 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 CHUKO15111 745 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 SERPINB6P35237 376 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 FCGRTP55899 365 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 THOC5Q13769 683 aaKnown RBP10.5□□□□□ -0.73
MCF2-209ENST00000520602 NOMO1Q15155 1222 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 FAM187BQ17R55 369 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 NBPF20Q3BBV1 942 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 CYB5D1Q6P9G0 228 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 RSRC1Q96IZ7 334 aaKnown RBP10.5□□□□□ -0.73
MCF2-209ENST00000520602 TMEM109Q9BVC6 243 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 FIS1Q9Y3D6 152 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 TADA2AO75478 443 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 JCHAINP01591 159 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 NCF2P19878 526 aaPredicted RBP10.5□□□□□ -0.73
MCF2-209ENST00000520602 BGNP21810 368 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 KLRC2P26717 231 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 LHX1P48742 406 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 NDUFV1P49821 464 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 LILRA4P59901 499 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 CFAP61Q8NHU2 1237 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 HSFY1Q96LI6 401 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 XPNPEP3Q9NQH7 507 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 EFR3BQ9Y2G0 817 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 WDR27A2RRH5 827 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 SDR42E2A6NKP2 422 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 GYG2O15488 501 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 ABHD2P08910 425 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 ODC1P11926 461 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 CPB1P15086 417 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 MX2P20592 715 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 PROZP22891 400 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 SLC25A11Q02978 314 aaKnown RBP10.5□□□□□ -0.73
MCF2-209ENST00000520602 CHI3L2Q15782 390 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 TRIM68Q6AZZ1 485 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 ITPRIPL1Q6GPH6 555 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 KIAA1841Q6NSI8 718 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 RFX8Q6ZV50 586 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 NIPA2Q8N8Q9 360 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 CMASQ8NFW8 434 aaPredicted RBP10.5□□□□□ -0.73
MCF2-209ENST00000520602 ATXN2LQ8WWM7 1075 aaKnown RBP10.5□□□□□ -0.73
MCF2-209ENST00000520602 ADAM2Q99965 735 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 FRMD8Q9BZ67 464 aaPredicted RBP10.5□□□□□ -0.73
MCF2-209ENST00000520602 KDM4CQ9H3R0 1056 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 TRPV2Q9Y5S1 764 aa10.5□□□□□ -0.73
MCF2-209ENST00000520602 TCRBV9S1A1TA0A576 114 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 TMEM63AO94886 807 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 TPH1P17752 444 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 FKBP1BP68106 108 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 SLC45A4Q5BKX6 768 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 ARID3BQ8IVW6 561 aaPredicted RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 WDR75Q8IWA0 830 aaKnown RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 ARHGAP24Q8N264 748 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 PCDH19Q8TAB3 1148 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 OLIG1Q8TAK6 271 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 RAET1EQ8TD07 263 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 NFKBIZQ9BYH8 718 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 CD248Q9HCU0 757 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 FAM105AQ9NUU6 356 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 HAO1Q9UJM8 370 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 POLBP06746 335 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 IVDP26440 423 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 MGAT1P26572 445 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 CD52P31358 61 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 OASLQ15646 514 aaKnown RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 PCSK7Q16549 785 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 SDCCAG8Q86SQ7 713 aaPredicted RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 CCDC185Q8N715 623 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 IPMKQ8NFU5 416 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 KCNV2Q8TDN2 545 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 ZNF75CPQ92670 426 aaPredicted RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 FGD4Q96M96 766 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 PRDM12Q9H4Q4 367 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 ACSS3Q9H6R3 686 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 POPDC2Q9HBU9 364 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 LTBP1Q14766 1721 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 QSER1Q2KHR3 1735 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 CFAP73A6NFT4 308 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 C3orf70A6NLC5 250 aaPredicted RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 FAM155BO75949 473 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 NOS2P35228 1153 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 MATKP42679 507 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 COG7P83436 770 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 GRB14Q14449 540 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 ICE2Q659A1 982 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 DRICH1Q6PGQ1 229 aaPredicted RBP10.49□□□□□ -0.73
MCF2-209ENST00000520602 NLRP9Q7RTR0 991 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 URGCPQ8TCY9 931 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 WNT8BQ93098 351 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 PEBP4Q96S96 227 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
MCF2-209ENST00000520602 SRRM3A6NNA2 597 aaPredicted RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 PMPCBO75439 489 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 HSPA4LO95757 839 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 BAG2O95816 211 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 ZBTB48P10074 688 aaPredicted RBP10.48□□□□□ -0.73
MCF2-209ENST00000520602 FDFT1P37268 417 aa10.48□□□□□ -0.73
MCF2-209ENST00000520602 BRCC3P46736 316 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms