RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 ABCB4P21439 1286 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 CASQ1P31415 396 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 GNL1P36915 607 aaPredicted RBP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 HADHBP55084 474 aaKnown RBP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 GPC5P78333 572 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 GABPB1Q06547 395 aaPredicted RBP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 ZNF252P-AS1Q0IIN9 211 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 CNGA2Q16280 664 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 ZC3H12AQ5D1E8 599 aaKnown RBP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 CNKSR3Q6P9H4 555 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 DCLRE1AQ6PJP8 1040 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 MON1BQ7L1V2 547 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 SLFN11Q7Z7L1 901 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 ACOT1Q86TX2 421 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 ADGRF2Q8IZF7 708 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 MCOLN2Q8IZK6 566 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 C12orf29Q8N999 325 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 LRRC57Q8N9N7 239 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 FLCNQ8NFG4 579 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 OR6B3Q8NGW1 331 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 SLC35G2Q8TBE7 412 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 URGCPQ8TCY9 931 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 RFFLQ8WZ73 363 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 SECISBP2LQ93073 1101 aaKnown RBP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 MISP3Q96FF7 219 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 HEXIM2Q96MH2 286 aaKnown RBP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 UROC1Q96N76 676 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 NOX5Q96PH1 765 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 DPEP3Q9H4B8 488 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 CACNA2D2Q9NY47 1150 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 CYTH4Q9UIA0 394 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 COG5Q9UP83 839 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 STXBP5LQ9Y2K9 1186 aa8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 ZNF638Q14966 1978 aaKnown RBP8.3□□□□□ -1.08
CTHRC1-203ENST00000520337 PATJQ8NI35 1801 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 ABHD14A-ACY1A0A1B0GW23 586 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 A8MXQ7 604 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 TMEM189-UBE2V1I3L0A0 370 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 I3L4J1 428 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 M0QZQ0 153 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 MED7O43513 233 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 HUS1O60921 280 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 ATP2C2O75185 946 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 PALMO75781 387 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 B3GAT3O94766 335 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 PFKMP08237 780 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 PDGFRBP09619 1106 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 CSF2RAP15509 400 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 MMP8P22894 467 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 PAX3P23760 479 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 MAPK8P45983 427 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 BRCC3P46736 316 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 AMPD2Q01433 879 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 ARHGAP17Q68EM7 881 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 MFSD5Q6N075 450 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 LCLAT1Q6UWP7 414 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 CBLL1Q75N03 491 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 NPAS4Q8IUM7 802 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 TMEM86AQ8N2M4 240 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 TRIM58Q8NG06 486 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 CTNNBL1Q8WYA6 563 aaPredicted RBP8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 VCPIP1Q96JH7 1222 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 RTP3Q9BQQ7 232 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 ZNF518BQ9C0D4 1074 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 SNX25Q9H3E2 840 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 NRDE2Q9H7Z3 1164 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 DNAJB4Q9UDY4 337 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 CHORDC1Q9UHD1 332 aaPredicted RBP8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 GTF3C4Q9UKN8 822 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 GREB1Q4ZG55 1949 aa8.29□□□□□ -1.08
CTHRC1-203ENST00000520337 TCRBV5S1A1TA0A578 114 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 CTAGE9A4FU28 777 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 ANKRD33BA6NCL7 494 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 BUB1BO60566 1050 aaPredicted RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 RNGTTO60942 597 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 ATP1A1P05023 1023 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 FAM87AP0C7U9 286 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 MYBL1P10243 752 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 RAG1P15918 1043 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 RRM1P23921 792 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 GPD2P43304 727 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 NOP2P46087 812 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 NSFP46459 744 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 CDK5R2Q13319 367 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 MAMLD1Q13495 774 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 GOLGA7BQ2TAP0 167 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 PAN2Q504Q3 1202 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 C2CD6Q53TS8 623 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 PAPD7Q5XG87 772 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 LLGL2Q6P1M3 1020 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 DSTYKQ6XUX3 929 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 MMS22LQ6ZRQ5 1243 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 C16orf59Q7L2K0 433 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 TTC30AQ86WT1 665 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 RHOT2Q8IXI1 618 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 TMEM35BQ8NCS4 154 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 C1orf131Q8NDD1 294 aaKnown RBP8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 UBA3Q8TBC4 463 aa8.28□□□□□ -1.08
CTHRC1-203ENST00000520337 SPATA18Q8TC71 538 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms