RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 COBLL1Q53SF7 1204 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 RHOUQ7L0Q8 258 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 TMPRSS9Q7Z410 1059 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 KRT78Q8N1N4 520 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 ZNF483Q8TF39 744 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-208ENST00000520228 SDR42E1Q8WUS8 393 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 EVI5LQ96CN4 794 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 FSD1Q9BTV5 496 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 MCM9Q9NXL9 1143 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 KCNE5Q9UJ90 142 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 CDYLQ9Y232 598 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 PCDHGB6Q9Y5F9 930 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 SLC4A4Q9Y6R1 1079 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 ZHX2Q9Y6X8 837 aa8.02□□□□□ -1.13
SDCBP-208ENST00000520228 CCL15-CCL14A0A0B4J2E2 113 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 TMEM200CA6NKL6 621 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 ISM1B1AKI9 464 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 CXCL11O14625 94 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 PRKAB2O43741 272 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 ZFPL1O95159 310 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 ABHD16AO95870 558 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 GPANK1O95872 356 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 BMPR1AP36894 532 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 SAFBQ15424 915 aaKnown RBP eCLIP8.01□□□□□ -1.13
SDCBP-208ENST00000520228 CCL15Q16663 113 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 BRI3BPQ8WY22 251 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 MYEOVQ96EZ4 313 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 STRBPQ96SI9 672 aaKnown RBP8.01□□□□□ -1.13
SDCBP-208ENST00000520228 GPR20Q99678 358 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 ADAM2Q99965 735 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 SMURF2Q9HAU4 748 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 ATP8A2Q9NTI2 1148 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 TMEM74BQ9NUR3 256 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 GPRC5BQ9NZH0 403 aa8.01□□□□□ -1.13
SDCBP-208ENST00000520228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.01□□□□□ -1.136e-6■□□□□ 10.2
SDCBP-208ENST00000520228 TRPM7Q96QT4 1865 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 ANO9A1A5B4 782 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 THP07101 528 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 SLC7A1P30825 629 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 TOB1P50616 345 aaPredicted RBP8□□□□□ -1.13
SDCBP-208ENST00000520228 PLCD1P51178 756 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 CXADRP78310 365 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 FNDC7Q5VTL7 733 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 POC1BQ8TC44 478 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 RILPL2Q969X0 211 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 FUBP1Q96AE4 644 aaKnown RBP8□□□□□ -1.13
SDCBP-208ENST00000520228 LENG9Q96B70 501 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 NACC2Q96BF6 587 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 CNPPD1Q9BV87 410 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 LRRC27Q9C0I9 530 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 SIK2Q9H0K1 926 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 DNAJC18Q9H819 358 aa8□□□□□ -1.13
SDCBP-208ENST00000520228 POLR2AP24928 1970 aaKnown RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 GPAA1O43292 621 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 MGEA5O60502 916 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 UNC5CO95185 931 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 KIF20AO95235 890 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 CENPBP07199 599 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 ASNSP08243 561 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 CYP2D6P10635 497 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 PIM1P11309 404 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 KCNJ5P48544 419 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 FMO1Q01740 532 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 PIGFQ07326 219 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 ZNF844Q08AG5 666 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 CYP2A13Q16696 494 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 CERKLQ49MI3 558 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 PPP4R4Q6NUP7 873 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 TATDN1Q6P1N9 297 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 FASTKD5Q7L8L6 764 aaKnown RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 TICAM2Q86XR7 235 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 CCAR1Q8IX12 1150 aaKnown RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 NSUN7Q8NE18 718 aaKnown RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 MAML1Q92585 1016 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 BOD1Q96IK1 185 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 SEC62Q99442 399 aaKnown RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.99□□□□□ -1.13
SDCBP-208ENST00000520228 CPNE7Q9UBL6 633 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 FAM50BQ9Y247 325 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 PLEKHM1Q9Y4G2 1056 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 AFG3L2Q9Y4W6 797 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 HS3ST4Q9Y661 456 aa7.99□□□□□ -1.13
SDCBP-208ENST00000520228 AKAP11Q9UKA4 1901 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 CCDC195A0A1B0GUA6 201 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 CCDC194A0A1B0GVG4 234 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 A0A1W2PS29 197 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 BTBD19C9JJ37 291 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 M0QYG6 137 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 SUN1O94901 812 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 NDUFA10O95299 355 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 GH2P01242 217 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 KCNA2P16389 499 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 LAG3P18627 525 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 SHMT1P34896 483 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 SUMO3P55854 103 aaPredicted RBP7.98□□□□□ -1.13
SDCBP-208ENST00000520228 GABPAQ06546 454 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 SPP2Q13103 211 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 TUBA3CQ13748 450 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 CNGA2Q16280 664 aa7.98□□□□□ -1.13
SDCBP-208ENST00000520228 C12orf60Q5U649 245 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms