RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 WDTC1Q8N5D0 677 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 LINC01465Q8N7H1 131 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 GBP7Q8N8V2 638 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 CXorf38Q8TB03 319 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 DENND1AQ8TEH3 1009 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 AFG1LQ8WV93 481 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ATG4AQ8WYN0 398 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 USP6NLQ92738 828 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 SGSM3Q96HU1 749 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 MAGEB18Q96M61 343 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CFAP57Q96MR6 1250 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 SCLT1Q96NL6 688 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 TCF12Q99081 682 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 MPHOSPH6Q99547 160 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 GPR20Q99678 358 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CORO1BQ9BR76 489 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CCDC77Q9BR77 488 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 DHRS4Q9BTZ2 278 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 DDX23Q9BUQ8 820 aaKnown RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 SPATC1LQ9H0A9 340 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 RABEP2Q9H5N1 569 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 CYP3A43Q9HB55 503 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 PAK6Q9NQU5 681 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 CISHQ9NSE2 258 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 HAUS2Q9NVX0 235 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.29□□□□□ -1.561e-28■□□□□ 8.9
SDC2-204ENST00000519914 SAMD15Q9P1V8 674 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 BTBD7Q9P203 1132 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 SLC24A2Q9UI40 661 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 ZMYND8Q9ULU4 1186 aaPredicted RBP5.29□□□□□ -1.56
SDC2-204ENST00000519914 PTPN22Q9Y2R2 807 aa5.29□□□□□ -1.56
SDC2-204ENST00000519914 A0A1B0GUA9 196 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 RBM47A0AV96 593 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 TLDC2A0PJX2 215 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TMEM120BA0PK00 339 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 MED7O43513 233 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 HBP1O60381 514 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 ASMTLO95671 621 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 CALCAP01258 141 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 KRT7P08729 469 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 CETPP11597 493 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 RDXP35241 583 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 PCK1P35558 622 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TCF7P36402 384 aaPredicted RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 ADCY8P40145 1251 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TNFSF9P41273 254 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 MAGEA4P43358 317 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 ZNF157P51786 506 aaPredicted RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 MYL6P60660 151 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 RPL7AP62424 266 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 OGDHQ02218 1023 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TNFAIP2Q03169 654 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 MBTD1Q05BQ5 628 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 INCA1Q0VD86 236 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 LAMTOR4Q0VGL1 99 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 FSTL1Q12841 308 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 BNIP3Q12983 259 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TFDP1Q14186 410 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 CRYMQ14894 314 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 RBBP5Q15291 538 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 MAPK6Q16659 721 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 KYNUQ16719 465 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 LONRF1Q17RB8 773 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 PTPN20Q4JDL3 420 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 LLGL2Q6P1M3 1020 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 DNAJC24Q6P3W2 148 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TRPM8Q7Z2W7 1104 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 ANKRD23Q86SG2 305 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TRABD2AQ86V40 505 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 GALNT12Q8IXK2 581 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 FUKQ8N0W3 1084 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 GJD3Q8N144 294 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 SHCBP1Q8NEM2 672 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 CMASQ8NFW8 434 aaPredicted RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 PRPF31Q8WWY3 499 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 MCRS1Q96EZ8 462 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 ANKRD36BP1Q96IX9 119 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 PRMT1Q99873 361 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 SELENOSQ9BQE4 189 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 ASB7Q9H672 318 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 ACSS3Q9H6R3 686 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 SLC40A1Q9NP59 571 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 KLC4Q9NSK0 619 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 GGA3Q9NZ52 723 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 DNPEPQ9ULA0 475 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TPX2Q9ULW0 747 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 SCAF8Q9UPN6 1271 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 SMG5Q9UPR3 1016 aaKnown RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 NAALADL1Q9UQQ1 740 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 USP15Q9Y4E8 981 aaPredicted RBP5.28□□□□□ -1.56
SDC2-204ENST00000519914 IVNS1ABPQ9Y6Y0 642 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 COL1A2P08123 1366 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 PLXNB2O15031 1838 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 ZNF236Q9UL36 1845 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 KAT6AQ92794 2004 aa5.28□□□□□ -1.56
SDC2-204ENST00000519914 TRIP11Q15643 1979 aa5.27□□□□□ -1.57
SDC2-204ENST00000519914 FAM47DPA6NHR8 397 aa5.27□□□□□ -1.57
SDC2-204ENST00000519914 UNCXA6NJT0 531 aa5.27□□□□□ -1.57
SDC2-204ENST00000519914 CHUKO15111 745 aa5.27□□□□□ -1.57
SDC2-204ENST00000519914 CILPO75339 1184 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms