RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 NME3Q13232 169 aa27.55■■■□□ 2
COL13A1-210ENST00000517713 XRCC4Q13426 336 aa27.55■■■□□ 2
COL13A1-210ENST00000517713 GLB1LQ6UWU2 654 aa27.55■■■□□ 2
COL13A1-210ENST00000517713 SUSD3Q96L08 255 aa27.55■■■□□ 2
COL13A1-210ENST00000517713 VPS37BQ9H9H4 285 aa27.55■■■□□ 2
COL13A1-210ENST00000517713 FRMPD3Q5JV73 1810 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 E7EVH7 732 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 NDUFAB1O14561 156 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 BANF1O75531 89 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 ITGB1P05556 798 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 CHN1P15882 459 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 AMPD1P23109 780 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 SLC10A2Q12908 348 aaPredicted RBP27.54■■■□□ 2
COL13A1-210ENST00000517713 OVOS1Q6IE37 1185 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 ANKMY2Q8IV38 441 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 SLAIN1Q8ND83 568 aa27.54■■■□□ 2
COL13A1-210ENST00000517713 ARHGEF37A1IGU5 675 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 E7ESA3 106 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 MSS51Q4VC12 460 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 NCBP2-AS2Q69YL0 99 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 THEM5Q8N1Q8 247 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 SLC7A14Q8TBB6 771 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 PYROXD1Q8WU10 500 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 PKMYT1Q99640 499 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 PIGVQ9NUD9 493 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 EXOC1LA0A1B0GW35 172 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 LTFP02788 710 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 BDNFP23560 247 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 RNASELQ05823 741 aaKnown RBP27.53■■■□□ 2
COL13A1-210ENST00000517713 KCNJ11Q14654 390 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 PDIK1LQ8N165 341 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 PRDM16Q9HAZ2 1276 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 TMLHEQ9NVH6 421 aa27.53■■■□□ 2
COL13A1-210ENST00000517713 CHADO15335 359 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 TRAPPC3O43617 180 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 CCT5P48643 541 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 SLC45A4Q5BKX6 768 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 NLRP14Q86W24 1093 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 RIBC1Q8N443 379 aaPredicted RBP27.52■■■□□ 2
COL13A1-210ENST00000517713 OR10T2Q8NGX3 314 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 LRRN4Q8WUT4 740 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 LINC01599Q8WXQ3 324 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 TMEM209Q96SK2 561 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 TMPRSS4Q9NRS4 437 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 RAB6BQ9NRW1 208 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 TBK1Q9UHD2 729 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 RSPH14Q9UHP6 348 aa27.52■■■□□ 2
COL13A1-210ENST00000517713 ZMYND8Q9ULU4 1186 aaPredicted RBP27.52■■■□□ 2
COL13A1-210ENST00000517713 GMNCA6NCL1 334 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 F8W810 466 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 NCAM1P13591 858 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 TYMPP19971 482 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 FAM189BP81408 668 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 CAPN12Q6ZSI9 719 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 CYP4X1Q8N118 509 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 SLC9A7Q96T83 725 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 ZMYND15Q9H091 742 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 ETNK2Q9NVF9 386 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 EURLQ9NYK6 297 aa27.51■■■□□ 2
COL13A1-210ENST00000517713 H3BRJ5 948 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 ARVCFO00192 962 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 GPX6P59796 221 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 MAPRE1Q15691 268 aaKnown RBP27.51■■□□□ 1.99
COL13A1-210ENST00000517713 EFHC2Q5JST6 749 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 CTU1Q7Z7A3 348 aaKnown RBP27.51■■□□□ 1.99
COL13A1-210ENST00000517713 LRRTM3Q86VH5 581 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 ZNF280BQ86YH2 543 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 RNF139Q8WU17 664 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 XPO6Q96QU8 1125 aaKnown RBP27.51■■□□□ 1.99
COL13A1-210ENST00000517713 CCT8L2Q96SF2 557 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 DTLQ9NZJ0 730 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 HTTP42858 3142 aa27.51■■□□□ 1.99
COL13A1-210ENST00000517713 DDHD2O94830 711 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 MAP2K2P36507 400 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 BBS9Q3SYG4 887 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 CLLU1OSQ5K130 101 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 KCNT2Q6UVM3 1135 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 C4orf22Q6V702 233 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 BHLHA9Q7RTU4 235 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 ATP11CQ8NB49 1132 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 ADAM32Q8TC27 787 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 QKIQ96PU8 341 aaKnown RBP eCLIP27.5■■□□□ 1.99
COL13A1-210ENST00000517713 DMAP1Q9NPF5 467 aaPredicted RBP27.5■■□□□ 1.99
COL13A1-210ENST00000517713 ARHGEF4Q9NR80 690 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 PCDHB8Q9UN66 801 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 MFHAS1Q9Y4C4 1052 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 GRK4P32298 578 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 AIF1P55008 147 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 TSPY1Q01534 308 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 NOMO2Q5JPE7 1267 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 FAM182AQ5T1J6 154 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 PPP1R21Q6ZMI0 780 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 BZW1Q7L1Q6 419 aaKnown RBP27.5■■□□□ 1.99
COL13A1-210ENST00000517713 FBXO36Q8NEA4 188 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 URGCPQ8TCY9 931 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 IRGQQ8WZA9 623 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 RRN3Q9NYV6 651 aa27.5■■□□□ 1.99
COL13A1-210ENST00000517713 CLUHO75153 1309 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 B4GALT3O60512 393 aa27.49■■□□□ 1.99
COL13A1-210ENST00000517713 FAM107AO95990 144 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms