RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 H7C1D1 291 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 DDX3XO00571 662 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 GYG2O15488 501 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 RNF113AO15541 343 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MTSS1O43312 755 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 AQP9O43315 295 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 KCNQ3O43525 872 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 DENRO43583 198 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PDE8AO60658 829 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SPAG7O75391 227 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TOM1L1O75674 476 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 OR5F1O95221 314 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 LARGE1O95461 756 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 DDX58O95786 925 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CD4P01730 458 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CYP1A1P04798 512 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 IFNA16P05015 189 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 C8BP07358 591 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CAPN1P07384 714 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 COL6A1P12109 1028 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 RARGP13631 454 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 GFAPP14136 432 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PFKFB1P16118 471 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF3P17036 446 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 HOXA7P31268 230 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 RRM2P31350 389 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 RPL9P32969 192 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 HSD17B2P37059 387 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PPP1R2P41236 205 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 HAAOP46952 286 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 DNM2P50570 870 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 HK2P52789 917 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 AP2S1P53680 142 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 VCPP55072 806 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MLLT6P55198 1093 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 VBP1P61758 197 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 IGBP1P78318 339 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 AMPD3Q01432 767 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CLCQ05315 142 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 GRSF1Q12849 480 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PDE1CQ14123 709 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MORC3Q14149 939 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TBCCQ15814 346 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SLC15A2Q16348 729 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MEA1Q16626 185 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 DGKDQ16760 1214 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 LRRC36Q1X8D7 754 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 GAB4Q2WGN9 574 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TWISTNBQ3B726 338 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 LEXMQ3ZCV2 418 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 FBXO43Q4G163 708 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 FIGNQ5HY92 759 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 AARS2Q5JTZ9 985 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 BEND3Q5T5X7 828 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MFSD5Q6N075 450 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ERAP2Q6P179 960 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 FAM171BQ6P995 826 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SHQ1Q6PI26 577 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 LILRA6Q6PI73 481 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 IZUMO2Q6UXV1 221 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ATG14Q6ZNE5 492 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF600Q6ZNG1 722 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TTLL10Q6ZVT0 673 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MCM10Q7L590 875 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 OSTM1Q86WC4 334 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 AMIGO3Q86WK7 504 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF677Q86XU0 584 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 STX12Q86Y82 276 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 KIAA2013Q8IYS2 634 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ELMOD2Q8IZ81 293 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ANKRD35Q8N283 1001 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CENPSQ8N2Z9 138 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 LILRB2Q8N423 598 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 KIF2BQ8N4N8 673 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MARVELD2Q8N4S9 558 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CPSF7Q8N684 471 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 FITM2Q8N6M3 262 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 NATD1Q8N6N6 113 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ICA1LQ8NDH6 482 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PJA1Q8NG27 643 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ZNF420Q8TAQ5 688 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 RAB3IL1Q8TBN0 382 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 SPATA18Q8TC71 538 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PPP1R13LQ8WUF5 828 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 CKAP2Q8WWK9 683 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 MYLIPQ8WY64 445 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 JADE3Q92613 823 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 LRRC59Q96AG4 307 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PLEKHA8Q96JA3 519 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TSNARE1Q96NA8 513 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PRMT1Q99873 361 aaKnown RBP4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 GAL3ST1Q99999 423 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 LRRC3Q9BY71 257 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 PITPNM3Q9BZ71 974 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 EDEM3Q9BZQ6 932 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 TRIM8Q9BZR9 551 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 B3GNT4Q9C0J1 378 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 KLHL25Q9H0H3 589 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 ABCG4Q9H172 646 aa4.98□□□□□ -1.61
HMGB1P19-201ENST00000517578 GLT8D2Q9H1C3 349 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms