RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 NRG2O14511 850 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 IRAK2O43187 625 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 COCHO43405 550 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 PROSCO94903 275 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 GJB6O95452 261 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 TRUB2O95900 331 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 IGLV3-27P01718 113 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 GBP1P32455 592 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 PCK1P35558 622 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC1A1P43005 524 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 NTHL1P78549 312 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 OGDHQ02218 1023 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 CBX2Q14781 532 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 TEAD2Q15562 447 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 TRIP4Q15650 581 aaPredicted RBP12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 ARHGAP29Q52LW3 1261 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 RSRC2Q7L4I2 434 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 SLFN11Q7Z7L1 901 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 PHLDB2Q86SQ0 1253 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 CMTM8Q8IZV2 173 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 EMC1Q8N766 993 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 TPCN2Q8NHX9 752 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 EDEM1Q92611 657 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC39A13Q96H72 371 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC46A2Q9BY10 475 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 TRIM7Q9C029 511 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 RNF38Q9H0F5 515 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 MARCH2Q9P0N8 246 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 ARHGAP26Q9UNA1 814 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 TFR2Q9UP52 801 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 USTQ9Y2C2 406 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 TLR6Q9Y2C9 796 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 PAXBP1Q9Y5B6 917 aa12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 SPTBN5Q9NRC6 3674 aaKnown RBP12.49□□□□□ -0.41
PDLIM5-220ENST00000514830 A0A0U1RQJ8 604 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 FAM170AA1A519 330 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 MBTPS2O43462 519 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 ABL1P00519 1130 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC2A3P11169 496 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 CEBPBP17676 345 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 HDCP19113 662 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 CXCR3P49682 368 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 AIF1P55008 147 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 RNASE9P60153 205 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 COG7P83436 770 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 CYP4F8P98187 520 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 PPP2R5DQ14738 602 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 BRMS1LQ5PSV4 323 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 GPR158Q5T848 1215 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 ACBD5Q5T8D3 534 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 TXNDC8Q6A555 127 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 TAC4Q86UU9 113 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 DDX42Q86XP3 938 aaKnown RBP eCLIP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 NPAS3Q8IXF0 933 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 LRRC57Q8N9N7 239 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 ITFG1Q8TB96 612 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 ATRIPQ8WXE1 791 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 FGF13Q92913 245 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 AZIN2Q96A70 460 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 ZFRQ96KR1 1074 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 CFAP57Q96MR6 1250 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 TBCBQ99426 244 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 KIF9Q9HAQ2 790 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 OBP2AQ9NY56 170 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 CDH7Q9ULB5 785 aa12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 USP15Q9Y4E8 981 aaPredicted RBP12.48□□□□□ -0.41
PDLIM5-220ENST00000514830 GRXCR2A6NFK2 248 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 M0QYT0 321 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 BUB1BO60566 1050 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 RNF8O76064 485 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 LATS1O95835 1130 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 TBX18O95935 607 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 KCNA5P22460 613 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 PSMA2P25787 234 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 RDXP35241 583 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 NOP2P46087 812 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 SULT1E1P49888 294 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 HDAC4P56524 1084 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 PITX1P78337 314 aaPredicted RBP12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 LRRC38Q5VT99 294 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 PSTKQ8IV42 348 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 SYCE1Q8N0S2 351 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 ARFGAP1Q8N6T3 406 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 MAB21L3Q8N8X9 362 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 FAM172AQ8WUF8 416 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 NTAN1Q96AB6 310 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 E2F7Q96AV8 911 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 SLC22A12Q96S37 553 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 APOL5Q9BWW9 433 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 POMKQ9H5K3 350 aa12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.47□□□□□ -0.41
PDLIM5-220ENST00000514830 CALCOCO1Q9P1Z2 691 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms