RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 DRG2P55039 364 aaKnown RBP16.63■□□□□ 0.25
NUP54-214ENST00000514307 SIX1Q15475 284 aaPredicted RBP16.63■□□□□ 0.25
NUP54-214ENST00000514307 ANKRD20A8PQ5CZ79 823 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 BRMS1LQ5PSV4 323 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 SDHAF4Q5VUM1 108 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
NUP54-214ENST00000514307 SCD5Q86SK9 330 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 ITIH5Q86UX2 942 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 FAM131BQ86XD5 332 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 STKLD1Q8NE28 680 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 GIPC2Q8TF65 315 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 HNRNPLLQ8WVV9 542 aaKnown RBP16.63■□□□□ 0.25
NUP54-214ENST00000514307 C1orf54Q8WWF1 131 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 ACSF2Q96CM8 615 aaPredicted RBP16.63■□□□□ 0.25
NUP54-214ENST00000514307 PEBP4Q96S96 227 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 ZNF670Q9BS34 389 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 TTLL2Q9BWV7 592 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 DCLK3Q9C098 648 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 ZBP1Q9H171 429 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 PCDH18Q9HCL0 1135 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 ASB3Q9Y575 518 aa16.63■□□□□ 0.25
NUP54-214ENST00000514307 MICAL3Q7RTP6 2002 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 SYNJ2BP-COX16A0A087WUM0 186 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 TCRBV7S2A1N4TA0A589 114 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 DAPK3O43293 454 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 RAD51CO43502 376 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 HEXIM1O94992 359 aaKnown RBP16.62■□□□□ 0.25
NUP54-214ENST00000514307 VNN2O95498 520 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 ECEL1O95672 775 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 ADH1AP07327 375 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 CCR1P32246 355 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 CA8P35219 290 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 SLC7A5Q01650 507 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 GUCY2DQ02846 1103 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 SCAPQ12770 1279 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 TAF10Q12962 218 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 CUL1Q13616 776 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 DPYSL3Q14195 570 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 LLGL1Q15334 1064 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 PABPC1LQ4VXU2 614 aaKnown RBP16.62■□□□□ 0.25
NUP54-214ENST00000514307 ZC3H12AQ5D1E8 599 aaKnown RBP16.62■□□□□ 0.25
NUP54-214ENST00000514307 PPP6R3Q5H9R7 873 aaPredicted RBP16.62■□□□□ 0.25
NUP54-214ENST00000514307 PDE12Q6L8Q7 609 aaKnown RBP16.62■□□□□ 0.25
NUP54-214ENST00000514307 CCDC149Q6ZUS6 474 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 RTL10Q7L3V2 364 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 CCHCR1Q8TD31 782 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 DQX1Q8TE96 717 aaKnown RBP16.62■□□□□ 0.25
NUP54-214ENST00000514307 P3H4Q92791 437 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 SLCO2A1Q92959 643 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 SERPINB11Q96P15 392 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 ERP44Q9BS26 406 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 EPC1Q9H2F5 836 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 SMOC2Q9H3U7 446 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 EPB41L5Q9HCM4 733 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 ARFGAP3Q9NP61 516 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 FAM114A2Q9NRY5 505 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 PIGVQ9NUD9 493 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 COX16Q9P0S2 106 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 UXTQ9UBK9 157 aaPredicted RBP16.62■□□□□ 0.25
NUP54-214ENST00000514307 ZNF148Q9UQR1 794 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 IRAK3Q9Y616 596 aa16.62■□□□□ 0.25
NUP54-214ENST00000514307 NDC80O14777 642 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 APOL1O14791 398 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 TEX28O15482 410 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 ZNF189O75820 626 aaPredicted RBP16.61■□□□□ 0.25
NUP54-214ENST00000514307 SEC24AO95486 1093 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 RARGP13631 454 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 TGM2P21980 687 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 DNAJB2P25686 324 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 KLRC2P26717 231 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 NR2C2P49116 596 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 SNX1Q13596 522 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 BYSLQ13895 437 aaKnown RBP16.61■□□□□ 0.25
NUP54-214ENST00000514307 PPP2R5DQ14738 602 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 PPP1R7Q15435 360 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 RAB6CQ53S08 254 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 MSANTD2Q6P1R3 559 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 TMCO3Q6UWJ1 677 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 CYP4V2Q6ZWL3 525 aaPredicted RBP16.61■□□□□ 0.25
NUP54-214ENST00000514307 GSTA5Q7RTV2 222 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 MRPL43Q8N983 215 aaKnown RBP16.61■□□□□ 0.25
NUP54-214ENST00000514307 GPR152Q8TDT2 470 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 MICAL1Q8TDZ2 1067 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 MYRFLQ96LU7 910 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 HAPLN3Q96S86 360 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 RAB6CQ9H0N0 254 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 OSBPL2Q9H1P3 480 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 CRISPLD1Q9H336 500 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 GDF3Q9NR23 364 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 TRPM5Q9NZQ8 1165 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 GMIPQ9P107 970 aa16.61■□□□□ 0.25
NUP54-214ENST00000514307 DMGDHQ9UI17 866 aaKnown RBP16.61■□□□□ 0.25
NUP54-214ENST00000514307 MAGED2Q9UNF1 606 aaPredicted RBP16.61■□□□□ 0.25
NUP54-214ENST00000514307 C5orf67F2Z3F1 127 aa16.6■□□□□ 0.25
NUP54-214ENST00000514307 APOC4-APOC2K7ER74 178 aa16.6■□□□□ 0.25
NUP54-214ENST00000514307 TTI1O43156 1089 aa16.6■□□□□ 0.25
NUP54-214ENST00000514307 SOAT2O75908 522 aa16.6■□□□□ 0.25
NUP54-214ENST00000514307 APOC2P02655 101 aa16.6■□□□□ 0.25
NUP54-214ENST00000514307 CNPP09543 421 aaKnown RBP16.6■□□□□ 0.25
NUP54-214ENST00000514307 H2AFXP16104 143 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms