RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 PIGVQ9NUD9 493 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 CWC15Q9P013 229 aaKnown RBP15.52■□□□□ 0.08
VCAN-211ENST00000513984 HEY1Q9Y5J3 304 aa15.52■□□□□ 0.08
VCAN-211ENST00000513984 CAPN9O14815 690 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 TCEA3O75764 348 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 ARL4AP40617 200 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 NR2C2P49116 596 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 ATP1A2P50993 1020 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 MAGOHP61326 146 aaKnown RBP15.52■□□□□ 0.07
VCAN-211ENST00000513984 XRCC4Q13426 336 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 NTAN1Q96AB6 310 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 TTC25Q96NG3 672 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 WDR6Q9NNW5 1121 aaKnown RBP15.52■□□□□ 0.07
VCAN-211ENST00000513984 SAYSD1Q9NPB0 183 aa15.52■□□□□ 0.07
VCAN-211ENST00000513984 DCDC2CA8MYV0 355 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 RGS16O15492 202 aaPredicted RBP15.51■□□□□ 0.07
VCAN-211ENST00000513984 OAZ2O95190 189 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 AGTP01019 485 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 GOT1P17174 413 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 HPDP32754 393 aaPredicted RBP15.51■□□□□ 0.07
VCAN-211ENST00000513984 ACTN2P35609 894 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 PPP2R2AP63151 447 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 RNASELQ05823 741 aaKnown RBP15.51■□□□□ 0.07
VCAN-211ENST00000513984 SCAPQ12770 1279 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 AUHQ13825 339 aaKnown RBP15.51■□□□□ 0.07
VCAN-211ENST00000513984 ANKRD22Q5VYY1 191 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 NCBP2-AS2Q69YL0 99 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 C4orf50Q6ZRC1 276 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 CENPUQ71F23 418 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 PYROXD2Q8N2H3 581 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 ZNF784Q8NCA9 323 aaPredicted RBP15.51■□□□□ 0.07
VCAN-211ENST00000513984 DBF4BQ8NFT6 615 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 C9orf72Q96LT7 481 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 SERPINB12Q96P63 405 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 STMN4Q9H169 189 aaPredicted RBP15.51■□□□□ 0.07
VCAN-211ENST00000513984 SLC12A6Q9UHW9 1150 aa15.51■□□□□ 0.07
VCAN-211ENST00000513984 TLDC2A0PJX2 215 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 ENPP3O14638 875 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 ALOX15BO15296 676 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 NCAM1P13591 858 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 OR1G1P47890 313 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 IRAK1P51617 712 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 GNGT1P63211 74 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 GBE1Q04446 702 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 NME3Q13232 169 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 HIF1AQ16665 826 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 EFHC2Q5JST6 749 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 BEND5Q7L4P6 421 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 CDKL3Q8IVW4 592 aaPredicted RBP15.5■□□□□ 0.07
VCAN-211ENST00000513984 RNF139Q8WU17 664 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 APBB2Q92870 758 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 FAM193BQ96PV7 902 aaPredicted RBP15.5■□□□□ 0.07
VCAN-211ENST00000513984 ARHGEF4Q9NR80 690 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 PAK5Q9P286 719 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 DNAJB4Q9UDY4 337 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 OGDHLQ9ULD0 1010 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 SF3B1O75533 1304 aaKnown RBP eCLIP15.5■□□□□ 0.07
VCAN-211ENST00000513984 GREB1Q4ZG55 1949 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 MYO18AQ92614 2054 aaKnown RBP15.5■□□□□ 0.07
VCAN-211ENST00000513984 SYNJ2BP-COX16A0A087WUM0 186 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 E7ESA3 106 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 H3BRJ5 948 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 EIF3HO15372 352 aaKnown RBP eCLIP15.5■□□□□ 0.07
VCAN-211ENST00000513984 KCNN4O15554 427 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 TRAPPC3O43617 180 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 TMEM63AO94886 807 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 AMPD1P23109 780 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 RBL1P28749 1068 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 SLC10A2Q12908 348 aaPredicted RBP15.5■□□□□ 0.07
VCAN-211ENST00000513984 LONRF1Q17RB8 773 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 SLC45A4Q5BKX6 768 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 LEKR1Q6ZMV7 388 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 B4GALNT4Q76KP1 1039 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 CTU1Q7Z7A3 348 aaKnown RBP15.5■□□□□ 0.07
VCAN-211ENST00000513984 SPATA2LQ8IUW3 424 aaPredicted RBP15.5■□□□□ 0.07
VCAN-211ENST00000513984 SEPT8Q92599 483 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 OLFM3Q96PB7 478 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 QKIQ96PU8 341 aaKnown RBP eCLIP15.5■□□□□ 0.07
VCAN-211ENST00000513984 ZCWPW1Q9H0M4 648 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 COX16Q9P0S2 106 aa15.5■□□□□ 0.07
VCAN-211ENST00000513984 SMIM23A6NLE4 172 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 SYN3O14994 580 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 F9P00740 461 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 IVLP07476 585 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 ADRA1BP35368 520 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 MDH1P40925 334 aaKnown RBP15.49■□□□□ 0.07
VCAN-211ENST00000513984 SLCO1A2P46721 670 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 NRLP54845 237 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 ARL4CP56559 192 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 BASP1P80723 227 aaKnown RBP15.49■□□□□ 0.07
VCAN-211ENST00000513984 KCNJ11Q14654 390 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 STAT4Q14765 748 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 FASTKD3Q14CZ7 662 aaKnown RBP15.49■□□□□ 0.07
VCAN-211ENST00000513984 C4orf22Q6V702 233 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 ABI1Q8IZP0 508 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 CASD1Q96PB1 797 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 DEFB118Q96PH6 123 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 TRIM62Q9BVG3 475 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 TMPRSS4Q9NRS4 437 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms