RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 ZNF217O75362 1048 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 TOP3BO95985 862 aaKnown RBP14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 KLKB1P03952 638 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 NDUFV2P19404 249 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 MCCD1P59942 119 aaPredicted RBP14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 COG7P83436 770 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 ENPEPQ07075 957 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 KRT39Q6A163 491 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 TADA2BQ86TJ2 420 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 SLC41A1Q8IVJ1 513 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 CEP76Q8TAP6 659 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 SEMA4DQ92854 862 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 P2RY11Q96G91 374 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 GABRG3Q99928 467 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 SLC6A17Q9H1V8 727 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 CACNA2D2Q9NY47 1150 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 CLIC5Q9NZA1 410 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 RASAL2Q9UJF2 1139 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 WASF3Q9UPY6 502 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 ZNF510Q9Y2H8 683 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 RAD54BQ9Y620 910 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 ADAMTS9Q9P2N4 1935 aa14.07□□□□□ -0.16
POLR2J3-217ENST00000513438 GFRA2O00451 464 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 ZNF202O95125 648 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 HMBSP08397 361 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 SERPINF2P08697 491 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 GTF2H1P32780 548 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 HOXD12P35452 270 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 ATXN3P54252 364 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 GFPT1Q06210 699 aaPredicted RBP14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 EFEMP1Q12805 493 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 ZCWPW2Q504Y3 356 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 SLC4A11Q8NBS3 891 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 TATDN2Q93075 761 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 EEF2KMTQ96G04 330 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 GTPBP2Q9BX10 602 aaKnown RBP14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 ADAM33Q9BZ11 813 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 UBXN6Q9BZV1 441 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 GOLPH3LQ9H4A5 285 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 SLC32A1Q9H598 525 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 CISHQ9NSE2 258 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 RAB20Q9NX57 234 aa14.06□□□□□ -0.16
POLR2J3-217ENST00000513438 CHKAP35790 457 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 RAD23BP54727 409 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 SEMA3BQ13214 749 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 FYB2Q5VWT5 728 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 PIGZQ86VD9 579 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 TTC39CQ8N584 583 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 TRIML1Q8N9V2 468 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 FBXL13Q8NEE6 735 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 FAXDC2Q96IV6 333 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 MRGPRX1Q96LB2 322 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 CDK5RAP1Q96SZ6 601 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 SCNM1Q9BWG6 230 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 DCLK3Q9C098 648 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 CAPN10Q9HC96 672 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 CD93Q9NPY3 652 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 SLC27A6Q9Y2P4 619 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 STON1Q9Y6Q2 735 aa14.05□□□□□ -0.16
POLR2J3-217ENST00000513438 A0A1W2PQ27 194 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 A0A1W2PQ64 194 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 A0A1W2PQD8 194 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 CETN3O15182 167 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 NDUFS2O75306 463 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 PENKP01210 267 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 CORO1AP31146 461 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 MXI1P50539 228 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 MFAP3P55082 362 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 COL9A2Q14055 689 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 GEN1Q17RS7 908 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 EDRF1Q3B7T1 1238 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 ARHGAP17Q68EM7 881 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 KIAA1324Q6UXG2 1013 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 RABEPKQ7Z6M1 372 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 PIP4P1Q86T03 277 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 DENND1CQ8IV53 801 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 SMYD4Q8IYR2 804 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 RGL4Q8IZJ4 473 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 ARHGAP18Q8N392 663 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 HDDC3Q8N4P3 179 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 KDF1Q8NAX2 398 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 ZNF419Q96HQ0 510 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 HSPA12BQ96MM6 686 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 ARID3AQ99856 593 aa14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 SCAND2PQ9GZW5 306 aaPredicted RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 AGO1Q9UL18 857 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-217ENST00000513438 SLC12A8A0AV02 714 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 TMEM8BA6NDV4 472 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 UPK3BL1B0FP48 263 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 UPK3BL2E5RIL1 263 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 ARHGAP33O14559 1287 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 STX10O60499 249 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 OPHN1O60890 802 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 EPB41P11171 864 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 MAOBP27338 520 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 TKTL1P51854 596 aa14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
POLR2J3-217ENST00000513438 FUT11Q495W5 492 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms