RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 KLHDC7AQ5VTJ3 777 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 DENND2CQ68D51 928 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 DARS2Q6PI48 645 aaKnown RBP2.73□□□□□ -1.97
PDGFC-208ENST00000512711 C9orf47Q6ZRZ4 202 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 RNF44Q7L0R7 432 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 FSTL5Q8N475 847 aaPredicted RBP2.73□□□□□ -1.97
PDGFC-208ENST00000512711 SUN3Q8TAQ9 357 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 ZDHHC12Q96GR4 267 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 VPS50Q96JG6 964 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 ZFYVE19Q96K21 471 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 MSLNLQ96KJ4 702 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 FAM227BQ96M60 508 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 ADGRE3Q9BY15 652 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 NUAK2Q9H093 628 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 FAM83DQ9H4H8 585 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 MLXIPQ9HAP2 919 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 FAM90A10PA6NDY2 464 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 GTPBP1O00178 669 aaKnown RBP2.72□□□□□ -1.97
PDGFC-208ENST00000512711 PRYO14603 147 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 INPPL1O15357 1258 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 TOMM40O96008 361 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 RBL1P28749 1068 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 TACR3P29371 465 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 THBS3P49746 956 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 HTR6P50406 440 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 JAK3P52333 1124 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 WDR5P61964 334 aaKnown RBP2.72□□□□□ -1.97
PDGFC-208ENST00000512711 ODF3L2Q3SX64 289 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 ANO7Q6IWH7 933 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 P3H2Q8IVL5 708 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 MMP21Q8N119 569 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 MYO1HQ8N1T3 1032 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 ARFGAP1Q8N6T3 406 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 ACRBPQ8NEB7 543 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 TTC8Q8TAM2 541 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 JDP2Q8WYK2 163 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 TIFAQ96CG3 184 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 HIC2Q96JB3 615 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 MARK4Q96L34 752 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 FCRL5Q96RD9 977 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 TMEM45AQ9NWC5 275 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 ZNF212Q9UDV6 495 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 RGS17Q9UGC6 210 aaPredicted RBP2.72□□□□□ -1.97
PDGFC-208ENST00000512711 COG5Q9UP83 839 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 PAXBP1Q9Y5B6 917 aa2.72□□□□□ -1.97
PDGFC-208ENST00000512711 SPATA31A1Q5TZJ5 1347 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 B4DGG1 531 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 M0QZQ0 153 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 SMAD6O43541 496 aaKnown RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 WDR47O94967 919 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 NDUFB8O95169 186 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 U2AF1L5P0DN76 240 aaPredicted RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ARP10275 920 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ST6GAL1P15907 406 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 RHCEP18577 417 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 SCP2P22307 547 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 PIK3CBP42338 1070 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 TXNL4AP83876 142 aaKnown RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 HSF1Q00613 529 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 U2AF1Q01081 240 aaKnown RBP eCLIP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 RHDQ02161 417 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 KCNJ12Q14500 433 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 CLCA4Q14CN2 919 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ST3GAL2Q16842 350 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 TMEM63BQ5T3F8 832 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 NUGGCQ68CJ6 796 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ZNF549Q6P9A3 640 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 KYAT3Q6YP21 454 aaKnown RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 SRGAP1Q7Z6B7 1085 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 PIM3Q86V86 326 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 NGDNQ8NEJ9 315 aaKnown RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 MBD3L2Q8NHZ7 208 aaPredicted RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ASB5Q8WWX0 329 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 PIGKQ92643 395 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 CELF1Q92879 486 aaKnown RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 PHKBQ93100 1093 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 SLC25A28Q96A46 364 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 P2RY11Q96G91 374 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ZNF668Q96K58 619 aaPredicted RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 STRBPQ96SI9 672 aaKnown RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 TRMOQ9BU70 441 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 FAM234AQ9H0X4 552 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 SLC25A32Q9H2D1 315 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 SEMA4BQ9NPR2 832 aaPredicted RBP2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ABHD10Q9NUJ1 306 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 ARL8BQ9NVJ2 186 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 OBP2AQ9NY56 170 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 MSRB1Q9NZV6 116 aa2.71□□□□□ -1.98
PDGFC-208ENST00000512711 IGLV5-39A0A0G2JS06 123 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 TMEM272A0A1B0GTI8 110 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 FOXN3O00409 490 aaPredicted RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 MGEA5O60502 916 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 UGDHO60701 494 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 TULP3O75386 442 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 INMTO95050 263 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 S100BP04271 92 aaPredicted RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 ANXA2P07355 339 aaKnown RBP2.7□□□□□ -1.98
PDGFC-208ENST00000512711 ALADP13716 330 aa2.7□□□□□ -1.98
PDGFC-208ENST00000512711 VPS41P49754 854 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms