RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 PRR23CQ6ZRP0 262 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 RRAGAQ7L523 313 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 CACNA2D4Q7Z3S7 1137 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 RASSF3Q86WH2 238 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
CDK7-208ENST00000512687 TRIML1Q8N9V2 468 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 RBBP8NLQ8NC74 664 aaPredicted RBP12.61□□□□□ -0.39
CDK7-208ENST00000512687 MDGA1Q8NFP4 955 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 BHMTQ93088 406 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 BBS2Q9BXC9 721 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 INTS2Q9H0H0 1204 aaKnown RBP12.61□□□□□ -0.39
CDK7-208ENST00000512687 DUSP15Q9H1R2 295 aaPredicted RBP12.61□□□□□ -0.39
CDK7-208ENST00000512687 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 DNAJC17Q9NVM6 304 aaKnown RBP12.61□□□□□ -0.39
CDK7-208ENST00000512687 PLK2Q9NYY3 685 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 DEC1Q9P2X7 70 aa12.61□□□□□ -0.39
CDK7-208ENST00000512687 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDK7-208ENST00000512687 TP53BP1Q12888 1972 aaPredicted RBP12.61□□□□□ -0.39
CDK7-208ENST00000512687 YJEFN3A6XGL0 299 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 E7ENQ6 273 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 PIK3R2O00459 728 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 GDF9O60383 454 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 AFPP02771 609 aaKnown RBP12.6□□□□□ -0.39
CDK7-208ENST00000512687 PAEPP09466 180 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 SETSIPP0DME0 302 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 BCKDHBP21953 392 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 CORO1AP31146 461 aaKnown RBP12.6□□□□□ -0.39
CDK7-208ENST00000512687 RGS7P49802 495 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 LMNB2Q03252 620 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 SF3A2Q15428 464 aaKnown RBP12.6□□□□□ -0.39
CDK7-208ENST00000512687 CSRP2Q16527 193 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 C10orf76Q5T2E6 689 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 EGFLAMQ63HQ2 1017 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 GRAMD4Q6IC98 578 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 LCLAT1Q6UWP7 414 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 CCDC26Q8TAB7 109 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 ZC3H10Q96K80 434 aaKnown RBP12.6□□□□□ -0.39
CDK7-208ENST00000512687 CNOT6LQ96LI5 555 aaKnown RBP12.6□□□□□ -0.39
CDK7-208ENST00000512687 SMOC1Q9H4F8 434 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 MARCH2Q9P0N8 246 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 HESX1Q9UBX0 185 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 RWDD2AQ9UIY3 292 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.6□□□□□ -0.39
CDK7-208ENST00000512687 GON4LQ3T8J9 2241 aa12.6□□□□□ -0.39
CDK7-208ENST00000512687 SLC12A8A0AV02 714 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
CDK7-208ENST00000512687 TBC1D3BA6NDS4 549 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 PRRT4C9JH25 899 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 M0QYV0 167 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 GNA14O95837 355 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 CISD3P0C7P0 127 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 WASP42768 502 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 ATXN1P54253 815 aaKnown RBP12.59□□□□□ -0.39
CDK7-208ENST00000512687 SLC8A3P57103 927 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 DAOAP59103 153 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 APBA1Q02410 837 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 GCNT1Q02742 428 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 PUM1Q14671 1186 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDK7-208ENST00000512687 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
CDK7-208ENST00000512687 FYB2Q5VWT5 728 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 PMF1Q6P1K2 205 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 GJB7Q6PEY0 223 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 ERMP1Q7Z2K6 904 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 TADA2BQ86TJ2 420 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 IRF2BP1Q8IU81 584 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 ARHGAP18Q8N392 663 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 ZNF513Q8N8E2 541 aaPredicted RBP12.59□□□□□ -0.39
CDK7-208ENST00000512687 OLIG1Q8TAK6 271 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 CLEC4CQ8WTT0 213 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 SLC35F5Q8WV83 523 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 KCTD13Q8WZ19 329 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 EDEM1Q92611 657 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 CDK5RAP1Q96SZ6 601 aaKnown RBP12.59□□□□□ -0.39
CDK7-208ENST00000512687 ACOX2Q99424 681 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 CLSTN2Q9H4D0 955 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 LRRC4Q9HBW1 653 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 SFMBT1Q9UHJ3 866 aa12.59□□□□□ -0.39
CDK7-208ENST00000512687 AGO1Q9UL18 857 aaKnown RBP12.59□□□□□ -0.39
CDK7-208ENST00000512687 SPTBN2O15020 2390 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 TCRBV21S2A2A0A5A6 115 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 MSI1O43347 362 aaKnown RBP12.58□□□□□ -0.4
CDK7-208ENST00000512687 PENKP01210 267 aaPredicted RBP12.58□□□□□ -0.4
CDK7-208ENST00000512687 LCP1P13796 627 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 PRKCSHP14314 528 aaPredicted RBP12.58□□□□□ -0.4
CDK7-208ENST00000512687 COG7P83436 770 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 TRIP4Q15650 581 aaPredicted RBP12.58□□□□□ -0.4
CDK7-208ENST00000512687 CNGA2Q16280 664 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 EOGTQ5NDL2 527 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 PLA2G2CQ5R387 149 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 BSPRYQ5W0U4 402 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 RSRC2Q7L4I2 434 aaKnown RBP12.58□□□□□ -0.4
CDK7-208ENST00000512687 DGLUCYQ7Z3D6 616 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 DENND1CQ8IV53 801 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 FMNL3Q8IVF7 1028 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 FAM217AQ8IXS0 508 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 SIX6OS1Q8N1H7 587 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 SCML4Q8N228 414 aa12.58□□□□□ -0.4
CDK7-208ENST00000512687 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms