RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 TRUB2O95900 331 aaKnown RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 RPSAP08865 295 aaKnown RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 HOXD13P35453 343 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 TUBP50607 506 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 LZTR1Q8N653 840 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 MRPL45Q9BRJ2 306 aaKnown RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 CINPQ9BW66 212 aaPredicted RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 UBR2Q8IWV8 1755 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 ADGRA3Q8IWK6 1321 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 CCT8L1PA6NM43 557 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 MAP2K2P36507 400 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 KPNA1P52294 538 aaPredicted RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 SLC10A6Q3KNW5 377 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 RASGEF1CQ8N431 466 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 PPP2R3CQ969Q6 453 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 FBXL18Q96ME1 805 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 GPR63Q9BZJ6 419 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 BRD8Q9H0E9 1235 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 GOLGA2P5Q9HBQ8 144 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 APOBEC3GQ9HC16 384 aaKnown RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 CPSF2Q9P2I0 782 aaKnown RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 TUBGCP4Q9UGJ1 667 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 NUDT5Q9UKK9 219 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 COG5Q9UP83 839 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 ITGB4P16144 1822 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 UNCXA6NJT0 531 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 RNF103O00237 685 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 MYL2P10916 166 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 MBL2P11226 248 aaPredicted RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 ELNP15502 786 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 ZNF135P52742 658 aaPredicted RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 IFI35P80217 286 aaPredicted RBP13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 ARHGAP1Q07960 439 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 MARC1Q5VT66 337 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 MREGQ8N565 214 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 BLOC1S5Q8TDH9 187 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 hCG_1818297A0A087WSY0 165 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 TIMM44O43615 452 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 DNAJB2P25686 324 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 CHI3L2Q15782 390 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 SPDYCQ5MJ68 293 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 TOP6BLQ8N6T0 577 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ZFP42Q96MM3 310 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 PCDHB8Q9UN66 801 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 CCDC88AQ3V6T2 1871 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 HACD1B0YJ81 288 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 CHUKO15111 745 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 STX7O15400 261 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 PIGRP01833 764 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 PYGLP06737 847 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 HABP4Q5JVS0 413 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 TFAP2DQ7Z6R9 452 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 OR12D3Q9UGF7 316 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 PAX3P23760 479 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 NUMBP49757 651 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 RENBPP51606 427 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ST8SIA6P61647 398 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 KDSRQ06136 332 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 BTG3Q14201 252 aaPredicted RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 NOMO2Q5JPE7 1267 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 C1orf146Q5VVC0 180 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 C10orf71Q711Q0 1435 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 UNC45BQ8IWX7 931 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 CDC26Q8NHZ8 85 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 LENG1Q96BZ8 264 aaPredicted RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ZBTB18Q99592 522 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 EML4Q9HC35 981 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ABCC13Q9NSE7 274 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 TMEM39AQ9NV64 488 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 TRHDEQ9UKU6 1024 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 VANGL2Q9ULK5 521 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 DNAJC6O75061 913 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ETS1P14921 441 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 MGAT5Q09328 741 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ANKRD20A8PQ5CZ79 823 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 SDCCAG3Q96C92 435 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 FTHL17Q9BXU8 183 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 SENP6Q9GZR1 1112 aaPredicted RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 NT5MQ9NPB1 228 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 AJAP1Q9UKB5 411 aaPredicted RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 ANGPTL2Q9UKU9 493 aa13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
PCDHA4-202ENST00000512229 NVLO15381 856 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 DDX3YO15523 660 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 GLRA3O75311 464 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 ASGR1P07306 291 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 TUFMP49411 452 aaKnown RBP13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 RAD23BP54727 409 aa13.49□□□□□ -0.25
PCDHA4-202ENST00000512229 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms