RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 WFIKKN2Q8TEU8 576 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 TM2D2Q9BX73 214 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 MS4A7Q9GZW8 240 aaPredicted RBP3.44□□□□□ -1.86
SUB1-208ENST00000511175 PPCSQ9HAB8 311 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 NMRK2Q9NPI5 230 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 TMEM45AQ9NWC5 275 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 ASAP1Q9ULH1 1129 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 PHTF1Q9UMS5 762 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 COG5Q9UP83 839 aa3.44□□□□□ -1.86
SUB1-208ENST00000511175 A0A087WYN8 130 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 TMEM272A0A1B0GTI8 110 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 CTIFO43310 598 aaKnown RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 EPN2O95208 641 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 ALDH2P05091 517 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 SLC5A1P13866 664 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 HOXB2P14652 356 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 HSPA6P17066 643 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 RHCEP18577 417 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 CD53P19397 219 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 AKAP5P24588 427 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 TACR3P29371 465 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 DEUP1Q05D60 604 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 PPATQ06203 517 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 CTBP1Q13363 440 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 ATAT1Q5SQI0 421 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 GFI1BQ5VTD9 330 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 DCAF12L1Q5VU92 463 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 CAPRIN2Q6IMN6 1127 aaKnown RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 B4GALNT4Q76KP1 1039 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 SPARTQ8N0X7 666 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 MYRIPQ8NFW9 859 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 EDC3Q96F86 508 aaKnown RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 TRMT61AQ96FX7 289 aaKnown RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 ZBTB45Q96K62 511 aaPredicted RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 LRGUKQ96M69 825 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 NAA15Q9BXJ9 866 aaKnown RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 MYLK2Q9H1R3 596 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 PLCB1Q9NQ66 1216 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 USP22Q9UPT9 525 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 FAM50BQ9Y247 325 aa3.43□□□□□ -1.86
SUB1-208ENST00000511175 SIRT4Q9Y6E7 314 aaPredicted RBP3.43□□□□□ -1.86
SUB1-208ENST00000511175 A0A1W2PPC1 479 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 M0R3H8 397 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 RRHO14718 337 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 FYB1O15117 783 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 INPPL1O15357 1258 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 PIP5K1CO60331 668 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 IL33O95760 270 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 SYF2O95926 243 aaKnown RBP3.42□□□□□ -1.86
SUB1-208ENST00000511175 ZBED1O96006 694 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 IGKV3-20P01619 116 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 CDC25AP30304 524 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 HOXA11P31270 313 aaPredicted RBP3.42□□□□□ -1.86
SUB1-208ENST00000511175 UQCRC1P31930 480 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 MCM5P33992 734 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 IL6STP40189 918 aaPredicted RBP3.42□□□□□ -1.86
SUB1-208ENST00000511175 TM4SF4P48230 202 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 TRAPPC10P48553 1259 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 TIRAPP58753 221 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 KPNB1Q14974 876 aaKnown RBP3.42□□□□□ -1.86
SUB1-208ENST00000511175 DENND2CQ68D51 928 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 GSG1LQ6UXU4 331 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 RFX8Q6ZV50 586 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 SRGAP1Q7Z6B7 1085 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 CUZD1Q86UP6 607 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 NUDCD2Q8WVJ2 157 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 MVB12AQ96EY5 273 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 CDK5RAP3Q96JB5 506 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 SLITRK1Q96PX8 696 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 MEIS3Q99687 375 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 NAP1L4Q99733 375 aaKnown RBP3.42□□□□□ -1.86
SUB1-208ENST00000511175 VN1R3Q9BXE9 311 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 ARHGAP39Q9C0H5 1083 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 NLRC4Q9NPP4 1024 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 LUZP4Q9P127 313 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 BCCIPQ9P287 314 aaKnown RBP eCLIP3.42□□□□□ -1.86
SUB1-208ENST00000511175 ZNF69Q9UC07 566 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 MAFFQ9ULX9 164 aa3.42□□□□□ -1.86
SUB1-208ENST00000511175 ABHD14A-ACY1A0A1B0GW23 586 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 FOXN3O00409 490 aaPredicted RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 TPP1O14773 563 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 AP1G1O43747 822 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 TMPRSS11DO60235 418 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 CTNND1O60716 968 aaKnown RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 SRGAP2O75044 1071 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 PLAUP00749 431 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 BDNFP23560 247 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 PRKAR1BP31321 381 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 AK2P54819 239 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 IRX6P78412 446 aaPredicted RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 ZNF267Q14586 743 aaPredicted RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 NFATC4Q14934 902 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 PFKFB3Q16875 520 aaPredicted RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 C9orf50Q5SZB4 431 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 TMEM63BQ5T3F8 832 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 IFIT1BQ5T764 474 aaKnown RBP3.41□□□□□ -1.86
SUB1-208ENST00000511175 XRRA1Q6P2D8 792 aa3.41□□□□□ -1.86
SUB1-208ENST00000511175 ZDHHC24Q6UX98 284 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms