RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 GDAP2Q9NXN4 497 aa16.68■□□□□ 0.26
SQSTM1-213ENST00000510187 SCN1AP35498 2009 aa16.68■□□□□ 0.26
SQSTM1-213ENST00000510187 POC1B-GALNT4F8VUJ3 575 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 B3GAT3O94766 335 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 ZWINTO95229 277 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 KDELR1P24390 212 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 IGFBP6P24592 240 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 GABRB2P47870 512 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 PSMC1P62191 440 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 DEFB103AP81534 67 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 DSC1Q08554 894 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.267e-7■■■□□ 14.9
SQSTM1-213ENST00000510187 SPDYAQ5MJ70 313 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 XYLT1Q86Y38 959 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 NAT8LQ8N9F0 302 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 C3orf58Q8NDZ4 430 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 RSPH1Q8WYR4 309 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 TOP1MTQ969P6 601 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 HAUS1Q96CS2 278 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 KLHL29Q96CT2 875 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 DHRS4Q9BTZ2 278 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 MRPL9Q9BYD2 267 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 TXLNGQ9NUQ3 528 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 TDRD15B5MCY1 1934 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 GOLGA8SH3BPF8 625 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 TYROBPO43914 113 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 B4GALT3O60512 393 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 CST8O60676 142 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 IFNB1P01574 187 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 FGBP02675 491 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 CD19P15391 556 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 RAD23BP54727 409 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 CBLBQ13191 982 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 SETDB1Q15047 1291 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 PAN2Q504Q3 1202 aaKnown RBP16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 COLGALT2Q8IYK4 626 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 ARFGAP1Q8N6T3 406 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 RSAD2Q8WXG1 361 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 CPT1BQ92523 772 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 ACSF2Q96CM8 615 aaPredicted RBP16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 RMDN2Q96LZ7 410 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 MCM8Q9UJA3 840 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 USH1CQ9Y6N9 552 aa16.67■□□□□ 0.26
SQSTM1-213ENST00000510187 CLUHO75153 1309 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 ZBBXA8MT70 800 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 APOC4-APOC2K7ER74 178 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 EDF1O60869 148 aaKnown RBP16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 HUS1O60921 280 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 SPAG7O75391 227 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 DGKIO75912 1065 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 APOC2P02655 101 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 IL1R2P27930 398 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 PCK1P35558 622 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 OR1G1P47890 313 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 GPX6P59796 221 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 SOWAHAQ2M3V2 549 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 FAM117BQ6P1L5 589 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 DCLRE1AQ6PJP8 1040 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 TMCO2Q7Z6W1 182 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 LRRC43Q8N309 656 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 APPL2Q8NEU8 664 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 CMASQ8NFW8 434 aaPredicted RBP16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 JOSD2Q8TAC2 188 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 LRRC8CQ8TDW0 803 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 PYROXD1Q8WU10 500 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 ALKBH8Q96BT7 664 aaKnown RBP16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 MCRS1Q96EZ8 462 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 ACSS3Q9H6R3 686 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 ZWILCHQ9H900 591 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 DNAJB4Q9UDY4 337 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 BAIAP2L1Q9UHR4 511 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 CYTH4Q9UIA0 394 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 RABGEF1Q9UJ41 708 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 PHTF1Q9UMS5 762 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 LTBP2Q14767 1821 aa16.66■□□□□ 0.26
SQSTM1-213ENST00000510187 CYB561D2O14569 222 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 DCTN3O75935 186 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 UNC5CO95185 931 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 CA4P22748 312 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 KCNJ2P63252 427 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 MGAT5Q09328 741 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 HHATQ5VTY9 493 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 PSRC1Q6PGN9 363 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 ADGRD1Q6QNK2 874 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 DSTYKQ6XUX3 929 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 ZNF398Q8TD17 642 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 HASPINQ8TF76 798 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 RAB3IPQ96QF0 476 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 PAIP2Q9BPZ3 127 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 LBHD1Q9BQE6 289 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 MRPL45Q9BRJ2 306 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 MIS12Q9H081 205 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 SYNCQ9H7C4 482 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 NRDE2Q9H7Z3 1164 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 METTL5Q9NRN9 209 aaKnown RBP16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 BARX2Q9UMQ3 279 aaPredicted RBP16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 MCF2LO15068 1137 aa16.65■□□□□ 0.26
SQSTM1-213ENST00000510187 CILPO75339 1184 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms