RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 R3HDM4Q96D70 268 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 Q96MF0 132 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 COQ10AQ96MF6 247 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 WDR11Q9BZH6 1224 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 TWSG1Q9GZX9 223 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 VPS16Q9H269 839 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 ELAC1Q9H777 363 aaKnown RBP4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 FSCN3Q9NQT6 498 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 ANKFY1Q9P2R3 1169 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 CCNL1Q9UK58 526 aaPredicted RBP4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 DAPP1Q9UN19 280 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 GABRQQ9UN88 632 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 CNTN6Q9UQ52 1028 aa4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 UBE2J1Q9Y385 318 aaPredicted RBP4.29□□□□□ -1.72
COL4A3BP-205ENST00000508692 MAST3O60307 1309 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 A0A1B0GVC2 190 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 GXYLT2A0PJZ3 443 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 RRN3P2A6NIE6 340 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 H0Y3Z8 333 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 CTIFO43310 598 aaKnown RBP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 LMNAP02545 664 aaKnown RBP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 TFRCP02786 760 aaKnown RBP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 FESP07332 822 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 RHOP08100 348 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 ZNF37AP17032 561 aaPredicted RBP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 KLRK1P26718 216 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 PBX1P40424 430 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 TLE2Q04725 743 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 CUL4BQ13620 913 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 FAM110CQ1W6H9 321 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 AASDHQ4L235 1098 aaPredicted RBP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 TTC22Q5TAA0 569 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 JAKMIP3Q5VZ66 844 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 KAZNQ674X7 775 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 CCDC144NLQ6NUI1 221 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 ANKRD16Q6P6B7 361 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 Q6ZNX1 250 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 HERC6Q8IVU3 1022 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 LRRC71Q8N4P6 559 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 TMEM57Q8N5G2 664 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 NAXEQ8NCW5 288 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 ABHD11Q8NFV4 315 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 AFG1LQ8WV93 481 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 ASB10Q8WXI3 467 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 SLC9A6Q92581 669 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 PPM1MQ96MI6 270 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 NOD2Q9HC29 1040 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 RIC8AQ9NPQ8 531 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 ARHGEF3Q9NR81 526 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 SNX15Q9NRS6 342 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 RASSF1Q9NS23 344 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 LIN7CQ9NUP9 197 aaKnown RBP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 FBXO28Q9NVF7 368 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 MGAT4CQ9UBM8 478 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 FEM1BQ9UK73 627 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 BAG5Q9UL15 447 aa4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 REXO2Q9Y3B8 237 aaKnown RBP4.28□□□□□ -1.72
COL4A3BP-205ENST00000508692 CCDC196A0A1B0GTZ2 297 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 B9A039 149 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 E7EVH7 732 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 PPP6R2O75170 966 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 RPP40O75818 363 aaKnown RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 URI1O94763 535 aaPredicted RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 VNN1O95497 513 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 CER1O95813 267 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 PYGLP06737 847 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 CHRM2P08172 466 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 MYCLP12524 364 aaPredicted RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 XBP1P17861 261 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 MAKP20794 623 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 DRD1P21728 446 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 ADRA1DP25100 572 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 SERPINA4P29622 427 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 CLCN2P51788 898 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 VAMP2P63027 116 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 CBFBQ13951 182 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 SMAD1Q15797 465 aaKnown RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 TXNRD1Q16881 649 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 BTBD16Q32M84 506 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 INTS11Q5TA45 600 aaKnown RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 MSANTD2Q6P1R3 559 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 PIK3AP1Q6ZUJ8 805 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 PTCHD4Q6ZW05 846 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 ANKS1BQ7Z6G8 1248 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 P3H2Q8IVL5 708 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 SUGP1Q8IWZ8 645 aaKnown RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 PNPLA1Q8N8W4 532 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 USP38Q8NB14 1042 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 HMGB4Q8WW32 186 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 GOLGA1Q92805 767 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 RFKQ969G6 155 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 REXO5Q96IC2 774 aaKnown RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 FAR2Q96K12 515 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 CINPQ9BW66 212 aaPredicted RBP4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 CCDC134Q9H6E4 229 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 CYP4F11Q9HBI6 524 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 G6PC2Q9NQR9 355 aa4.27□□□□□ -1.73
COL4A3BP-205ENST00000508692 SLC2A4RGQ9NR83 387 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms