RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 MBD1Q9UIS9 605 aaPredicted RBP17.02■□□□□ 0.32
LMNA-222ENST00000508500 LSM7Q9UK45 103 aaKnown RBP17.02■□□□□ 0.32
LMNA-222ENST00000508500 A0A1W2PQF6 199 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 O00370 1275 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 BIN1O00499 593 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 XPO1O14980 1071 aaKnown RBP17.01■□□□□ 0.31
LMNA-222ENST00000508500 PMM2O15305 246 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 HMBSP08397 361 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 PTMSP20962 102 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 YWHAGP61981 247 aaKnown RBP eCLIP17.01■□□□□ 0.31
LMNA-222ENST00000508500 CREB5Q02930 508 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 ELF2Q15723 593 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 MAP7D1Q3KQU3 841 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 AASDHQ4L235 1098 aaPredicted RBP17.01■□□□□ 0.31
LMNA-222ENST00000508500 SGO2Q562F6 1265 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 FYB2Q5VWT5 728 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 KCNV2Q8TDN2 545 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 NELFBQ8WX92 580 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 BHMTQ93088 406 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 GTPBP4Q9BZE4 634 aaKnown RBP17.01■□□□□ 0.31
LMNA-222ENST00000508500 DNAI2Q9GZS0 605 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 METTL14Q9HCE5 456 aaKnown RBP17.01■□□□□ 0.31
LMNA-222ENST00000508500 POLMQ9NP87 494 aaPredicted RBP17.01■□□□□ 0.31
LMNA-222ENST00000508500 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 WDR35Q9P2L0 1181 aa17.01■□□□□ 0.31
LMNA-222ENST00000508500 HOOK1Q9UJC3 728 aaKnown RBP17.01■□□□□ 0.31
LMNA-222ENST00000508500 TCRBV21S2A2A0A5A6 115 aa17■□□□□ 0.31
LMNA-222ENST00000508500 ZBED1O96006 694 aa17■□□□□ 0.31
LMNA-222ENST00000508500 PENKP01210 267 aaPredicted RBP17■□□□□ 0.31
LMNA-222ENST00000508500 VDRP11473 427 aa17■□□□□ 0.31
LMNA-222ENST00000508500 CD19P15391 556 aa17■□□□□ 0.31
LMNA-222ENST00000508500 GABRG2P18507 467 aa17■□□□□ 0.31
LMNA-222ENST00000508500 PMLP29590 882 aa17■□□□□ 0.31
LMNA-222ENST00000508500 BCAT1P54687 386 aa17■□□□□ 0.31
LMNA-222ENST00000508500 STX17P56962 302 aa17■□□□□ 0.31
LMNA-222ENST00000508500 GOLGA8FQ08AF8 430 aa17■□□□□ 0.31
LMNA-222ENST00000508500 GOLGA8DPQ0D2H9 430 aa17■□□□□ 0.31
LMNA-222ENST00000508500 FOXR2Q6PJQ5 311 aa17■□□□□ 0.31
LMNA-222ENST00000508500 ARHGEF19Q8IW93 802 aa17■□□□□ 0.31
LMNA-222ENST00000508500 C12orf50Q8NA57 414 aaPredicted RBP17■□□□□ 0.31
LMNA-222ENST00000508500 HMGB4Q8WW32 186 aa17■□□□□ 0.31
LMNA-222ENST00000508500 XPO6Q96QU8 1125 aaKnown RBP17■□□□□ 0.31
LMNA-222ENST00000508500 AGO1Q9UL18 857 aaKnown RBP17■□□□□ 0.31
LMNA-222ENST00000508500 CLEC4EQ9ULY5 219 aa17■□□□□ 0.31
LMNA-222ENST00000508500 CTNND2Q9UQB3 1225 aa17■□□□□ 0.31
LMNA-222ENST00000508500 MUC22E2RYF6 1773 aaPredicted RBP17■□□□□ 0.31
LMNA-222ENST00000508500 PCNX2A6NKB5 2137 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 YJEFN3A6XGL0 299 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 PATE3B3GLJ2 98 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 E7ENQ6 273 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 ALDH1A2O94788 518 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 CAVIN2O95810 425 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 HOXB2P14652 356 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
LMNA-222ENST00000508500 NTSR1P30989 418 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 CORO1AP31146 461 aaKnown RBP16.99■□□□□ 0.31
LMNA-222ENST00000508500 DGKGP49619 791 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 COG7P83436 770 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 ADIGQ0VDE8 80 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 BST2Q10589 180 aaKnown RBP16.99■□□□□ 0.31
LMNA-222ENST00000508500 STIM1Q13586 685 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 CCDC40Q4G0X9 1142 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 STPG1Q5TH74 334 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 KIAA1211LQ6NV74 962 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 TMEM270Q6UE05 265 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 TADA2BQ86TJ2 420 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 DENND1CQ8IV53 801 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 TRIM59Q8IWR1 403 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 KCTD13Q8WZ19 329 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 ERLEC1Q96DZ1 483 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 CDK5RAP1Q96SZ6 601 aaKnown RBP16.99■□□□□ 0.31
LMNA-222ENST00000508500 MARCH2Q9P0N8 246 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 CHD6Q8TD26 2715 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 NUMA1Q14980 2115 aa16.99■□□□□ 0.31
LMNA-222ENST00000508500 SLC12A8A0AV02 714 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 WASH3PC4AMC7 463 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 PPP1R2P41236 205 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 YWHAEP62258 255 aaKnown RBP16.98■□□□□ 0.31
LMNA-222ENST00000508500 SHC2P98077 582 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 GEN1Q17RS7 908 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 PREPLQ4J6C6 727 aaPredicted RBP16.98■□□□□ 0.31
LMNA-222ENST00000508500 PMF1Q6P1K2 205 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 LCLAT1Q6UWP7 414 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 RRAGAQ7L523 313 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 FAM217AQ8IXS0 508 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 ARHGAP18Q8N392 663 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 EHBP1Q8NDI1 1231 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 SLC35F5Q8WV83 523 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 DDX1Q92499 740 aaKnown RBP16.98■□□□□ 0.31
LMNA-222ENST00000508500 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 NT5C1BQ96P26 610 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 MED15Q96RN5 788 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 GABRG3Q99928 467 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 LRRC4Q9HBW1 653 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 CD93Q9NPY3 652 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 BCCIPQ9P287 314 aaKnown RBP eCLIP16.98■□□□□ 0.31
LMNA-222ENST00000508500 SFMBT1Q9UHJ3 866 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 PCDHB4Q9Y5E5 795 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 PCDH15Q96QU1 1955 aa16.98■□□□□ 0.31
LMNA-222ENST00000508500 CACNA1EQ15878 2313 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms