RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 EML3Q32P44 896 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 EFHC2Q5JST6 749 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 FAM46CQ5VWP2 391 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LYSMD4Q5XG99 296 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CHST9Q7L1S5 443 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 FRMD5Q7Z6J6 570 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 MIB1Q86YT6 1006 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RASGRP3Q8IV61 690 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 MAML2Q8IZL2 1156 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RPLP0P6Q8NHW5 317 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 C2orf15Q8WU43 125 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PPP1R13BQ96KQ4 1090 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 AIFM3Q96NN9 605 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 C17orf75Q9HAS0 396 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ARFGAP3Q9NP61 516 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DDX56Q9NY93 547 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 VPS28Q9UK41 221 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ATP8A1Q9Y2Q0 1164 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 UBIAD1Q9Y5Z9 338 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 MYO10Q9HD67 2058 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LINC01553A4QN01 128 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PRR5-ARHGAP8B1AHC4 643 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LMNAP02545 664 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SOD2P04179 222 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ITGB1P05556 798 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 INHBAP08476 426 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 IL9P15248 144 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ACAT1P24752 427 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 GUCY2CP25092 1073 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RFC1P35251 1148 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CXCL12P48061 93 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 BCAT1P54687 386 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PRAMEP78395 509 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TARBP2Q15633 366 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 IL27RAQ6UWB1 636 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SIRT2Q8IXJ6 389 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF557Q8N988 423 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 OR14C36Q8NHC7 312 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 MCUR1Q96AQ8 359 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ZBTB18Q99592 522 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SYT15Q9BQS2 421 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TARS2Q9BW92 718 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 KRTAP17-1Q9BYP8 105 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 AGXT2Q9BYV1 514 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 KLHL8Q9P2G9 620 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DMGDHQ9UI17 866 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ZFP37Q9Y6Q3 630 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 AKR1B15C9JRZ8 316 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 GSTA4O15217 222 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LRRN2O75325 713 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RASSF9O75901 435 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RECKO95980 971 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CPP00450 1065 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CNPP09543 421 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 MYBL2P10244 700 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RARGP13631 454 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CST5P28325 142 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF131P52739 623 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SESN3P58005 492 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 IRX1P78414 480 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LRRC74AQ0VAA2 488 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TBX2Q13207 712 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 NNTQ13423 1086 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PDIA5Q14554 519 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CBX2Q14781 532 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TOMM20Q15388 145 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 EXOC3L4Q17RC7 722 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RSPO4Q2I0M5 234 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 GLE1Q53GS7 698 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ALFQ53S48 1182 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SDHAF4Q5VUM1 108 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TPGS2Q68CL5 300 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DOK6Q6PKX4 331 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RRAGAQ7L523 313 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 Q8N9G6 341 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 IL31RAQ8NI17 732 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SGSM3Q96HU1 749 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SENP8Q96LD8 212 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 P2RY13Q9BPV8 354 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DESI2Q9BSY9 194 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 EIF2AQ9BY44 585 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TGIF2Q9GZN2 237 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LHX5Q9H2C1 402 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RASSF4Q9H2L5 321 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PLEKHA4Q9H4M7 779 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 WDCPQ9H6R7 721 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PCDH12Q9NPG4 1184 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LZTFL1Q9NQ48 299 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RASSF1Q9NS23 344 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 FAM207AQ9NSI2 230 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D13Q9NVG8 400 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PLAGL2Q9UPG8 496 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 EP300Q09472 2414 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 IQANK1A0A1B0GTG1 560 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LRRC72A6NJI9 287 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 LRRIQ3A6PVS8 624 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 C2CD4DB7Z1M9 353 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ZNF500O60304 480 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms